SCMD Saccharomyces Cerevisiae Morphological Database
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Keywords: (ex. rad52, polarisome)

Sortable ORF Parameter Sheet

Parameter Name:DCV14-3_A1B
Stain Type:Nucleus
Nucleus Status:A1B
Parameter Type:Coefficient of Variation
Description:Area of nucleus region in nucleus A1B
Definition:Area of nucleus region in nucleus A1B
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ORF Std. Name DCV14-3_A1B
YML112w CTK3 0.449
RNA polymerase II C-terminal domain kinase gamma subunit, similar to cyclin-dependent kinase
YHR189w PTH1 0.450
One of two (see also PTH2) mitochondrially-localized peptidyl-tRNA hydrolases: dispensable for cell growth and for mitochondrial respiration
YLR447c VMA6 0.455
vacuolar ATPase V0 domain subunit d (36 kDa)|vacuolar H(+) ATPase 36 kDa subunit (D subunit of VO sector)
YLR327c 0.460
Hypothetical ORF
YNL250w RAD50 0.463
Mre11-Rad50-Xrs2 protein complex member involved in joining double-stranded breaks and DNA recombination
YAL035w FUN12 0.470
GTPase, required for general translation initiation by promoting Met-tRNAiMet binding to ribosomes and ribosomal subunit joining: homolog of bacterial IF2
YLR181c VTA1 0.474
Has coiled-coil domains and is involved in class E vacuolar-protein sorting; binds to Vps20 and Vps4 and may regulate Vps4 function
YMR219w ESC1 0.477
Protein localizesd to the nuclear periphery, involved in telomeric silencing; interacts with PAD4-domain of Sir4p
YOL072w THP1 0.478
YLR370c ARC18 0.481
Arp2/3 complex subunit
YLR110c CCW12 0.482
cell wall mannoprotein
YDR432w NPL3 0.482
RNA-binding protein that carries poly(A)+ mRNA from the nucleus into the cytoplasm: phosphorylation by Sky1p in the cytoplasm may promote release of mRNAs
YOR235w 0.489
Hypothetical ORF
YBR194w 0.490
Synthetic with Old Yellow Enzyme
YMR267w PPA2 0.492
inorganic pyrophosphatase
YER151c UBP3 0.498
ubiquitin-specific protease
YAL048c GEM1 0.513
Evolutionarily-conserved tail-anchored outer mitochondrial membrane GTPase which regulates mitochondrial morphology: cells lacking Gem1p contain collapsed, globular, or grape-like mitochondria: not required for pheromone-induced cell death
YDR245w MNN10 0.523
Subunit of a Golgi mannosyltransferase complex also containing Anp1p, Mnn9p, Mnn11p, and Hoc1p that mediates elongation of the polysaccharide mannan backbone: membrane protein of the mannosyltransferase family
YDR200c VPS64 0.527
YGR105w VMA21 0.541
Protein involved in vacuolar H-ATPase assembly or function. Required for the biogenesis of a functional vacuolar ATPase (V-ATPase), but not part of the final enzyme complex.
YOR332w VMA4 0.549
E subunit of V1 sector|vacuolar H(+) ATPase 27 kDa subunit
YLR023c IZH3 0.549
Membrane protein involved in zinc metabolism, member of the four-protein IZH family, expression induced by zinc deficiency; deletion reduces sensitivity to elevated zinc and shortens lag phase, overexpression reduces Zap1p activity
YPR070w MED1 0.562
essential for transcriptional regulation|mediator complex subunit 1
YGL223c COG1 0.573
Component of the conserved oligomeric Golgi complex; interacts with Cog2p
YPR074c TKL1 0.593
transketolase 1
YBR112c CYC8 0.596
General transcriptional co-repressor, acts together with Tup1p: also acts as part of a transcriptional co-activator complex that recruits the SWI/SNF and SAGA complexes to promoters
YPR076w 0.598
Hypothetical ORF
YOR245c DGA1 0.605
Acyl-CoA : diacylglycerol acyltransferase
YOR080w DIA2 0.654
Protein of unknown function, involved in invasive and pseudohyphal growth
YNL298w CLA4 0.672
Ste20p homolog|protein kinase
YBR200w BEM1 0.701
Protein containing SH3-domains, involved in establishing cell polarity and morphogenesis: functions as a scaffold protein for complexes that include Cdc24p, Ste5p, Ste20p, and Rsr1p
YKL139w CTK1 0.727
kinase subunit of RNA polymerase II carboxy-terminal domain kinase I
YOR327c SNC2 0.743
vesicle-associated membrane protein (synaptobrevin) homolog
YDL116w NUP84 0.828
nuclear pore complex subunit|similar to mammalian Nup107p
YOL086c ADH1 0.858
alcohol dehydrogenase
YGL163c RAD54 0.966
DNA-dependent ATPase, stimulates strand exchange by modifying the topology of double-stranded DNA; involved in the recombinational repair of double-strand breaks in DNA during vegetative growth and meiosis; member of the SWI/SNF family
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