SCMD Saccharomyces Cerevisiae Morphological Database
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Keywords: (ex. rad52, polarisome)

Sortable ORF Parameter Sheet

Parameter Name:C117_A1B
Stain Type:Cell Wall
Nucleus Status:A1B
Parameter Type:Average
Description:Ratio of the countour length on nucleus A1B
Definition:Ratio of the countour length on nucleus A1B
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ORF Std. Name C117_A1B
YPR164w MMS1 0.558
Protein likely involved in protection against replication-dependent DNA damage: mutants are sensitive to methyl methanesulfonate (MMS): implicated in regulation of Ty1 transposition
YDR076w RAD55 0.558
RecA homolog|interacts with Rad51p and Rad57p by two-hybrid analysis|similar to DMC1, RAD51, RAD57
YKL113c RAD27 0.559
42 kDa 5' to 3' exonuclease required for Okazaki fragment processing
YKL204w EAP1 0.561
eIF4E-associated protein, binds eIF4E and inhibits cap-dependent translation, also functions independently of eIF4E to maintain genetic stability; plays a role in cell growth, implicated in the TOR signaling cascade
YNL250w RAD50 0.563
Mre11-Rad50-Xrs2 protein complex member involved in joining double-stranded breaks and DNA recombination
YHR200w RPN10 0.565
Non-ATPase base subunit of the 19S regulatory particle (RP) of the 26S proteasome: N-terminus plays a role in maintaining the structural integrity of the RP: binds selectively to polyubiquitin chains: homolog of the mammalian S5a protein
YML028w TSA1 0.569
Thioredoxin-peroxidase (TPx), reduces H2O2 and alkyl hydroperoxides with the use of hydrogens provided by thioredoxin, thioredoxin reductase, and NADPH: provides protection against oxidation systems that generate reactive oxygen and sulfur species
YBR081c SPT7 0.569
histone acetyltransferase SAGA complex member|transcription factor
YMR179w SPT21 0.572
non-specific DNA binding protein
YGR092w DBF2 0.575
Kinase required for late nuclear division. Cdc15 promotes the exit from mitosis by directly switching on the kinase activity of Dbf2.
YMR224c MRE11 0.576
Subunit of a complex with Rad50p and Xrs2p (RMX complex) that functions in repair of DNA double-strand breaks and in telomere stability, exhibits nuclease activity that appears to be required for RMX function: widely conserved
YDR004w RAD57 0.579
RecA homolog|interacts with Rad 55p by two-hybrid analysis|similar to DMC1, RAD51, and RAD55
YDR138w HPR1 0.579
Subunit of THO/TREX, related complexes that couple transcription elongation with mitotic recombination and elongation with mRNA metabolism and export, subunit of an RNA Pol II complex; regulates lifespan; similar to Top1p
YPR120c CLB5 0.582
B-type cyclin
YLR318w EST2 0.584
Reverse transcriptase subunit of the telomerase holoenzyme, essential for telomerase core catalytic activity, involved in other aspects of telomerase assembly and function
YOR241w MET7 0.585
Folylpolyglutamate synthetase, catalyzes extension of the glutamate chains of the folate coenzymes, required for methionine synthesis and for maintenance of mitochondrial DNA, present in both the cytoplasm and mitochondria
YDR532c 0.589
Protein of unknown function that localizes to the nuclear side of the spindle pole body and along short spindles; forms a complex with Spc105p
YDL013w HEX3 0.590
Ring finger protein involved in the DNA damage response with possible recombination role: genetically identified by synthetic lethality with SGS1 (DNA helicase) and TOP3 (DNA topoisomerase): sporulation role: interacts with Slx8p and Lin1p
YPR141c KAR3 0.592
Minus-end-directed microtubule motor that functions in mitosis and meiosis, localizes to the spindle pole body and localization is dependent on functional Cik1p, required for nuclear fusion during mating: potential Cdc28p substrate
YMR078c CTF18 0.595
Subunit of a complex with Ctf8p that shares some subunits with Replication Factor C and is required for sister chromatid cohesion; may have overlapping functions with Rad24p in the DNA damage replication checkpoint
YLR233c EST1 0.604
Telomere elongation protein
YHR154w RTT107 0.608
Regulator of Ty1 Transposition; Establishes Silent Chromatin
YNL171c 0.610
Hypothetical ORF
YML032c RAD52 0.614
Protein that stimulates strand exchange by facilitating Rad51p binding to single-stranded DNA; anneals complementary single-stranded DNA; involved in the repair of double-strand breaks in DNA during vegetative growth and meiosis
YOR080w DIA2 0.618
Protein of unknown function, involved in invasive and pseudohyphal growth
YGL163c RAD54 0.622
DNA-dependent ATPase, stimulates strand exchange by modifying the topology of double-stranded DNA; involved in the recombinational repair of double-strand breaks in DNA during vegetative growth and meiosis; member of the SWI/SNF family
YCR066w RAD18 0.623
ATPase (putative)|zinc finger protein
YLL002w RTT109 0.624
Regulator of Ty1 Transposition; Regulation of mitochondrial network; Killed in Mutagen, sensitive to diepoxybutane and/or mitomycin C
YPR135w CTF4 0.625
DNA polymerase alpha binding protein
YDL116w NUP84 0.626
nuclear pore complex subunit|similar to mammalian Nup107p
YIL040w 0.637
Protein of unknown function, localizes to the endoplasmic reticulum
YHR191c CTF8 0.637
Subunit of a complex with Ctf18p that shares some subunits with Replication Factor C and is required for sister chromatid cohesion
YPL106c SSE1 0.657
HSP70 family|SSA1 SSE2 homolog
YJL115w ASF1 0.659
anti-silencing protein that causes depression of silent loci when overexpressed
YDR159w SAC3 0.667
A component of the nuclear pore that is involved in the nuclear export of both mRNA and protein
YDR369c XRS2 0.671
DNA repair protein
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