SCMD Saccharomyces Cerevisiae Morphological Database
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Keywords: (ex. rad52, polarisome)

Sortable ORF Parameter Sheet

Parameter Name:A7-2_C
Stain Type:Actin
Nucleus Status:C
Parameter Type:Average
Description:Actin region size in bud on nucleus C
Definition:Actin region size in bud on nucleus C
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ORF Std. Name A7-2_C
YER155c BEM2 297
Rho GTPase activating protein (RhoGAP) involved in the control of cytoskeleton organization and cellular morphogenesis: required for bud emergence
YML028w TSA1 297
Thioredoxin-peroxidase (TPx), reduces H2O2 and alkyl hydroperoxides with the use of hydrogens provided by thioredoxin, thioredoxin reductase, and NADPH: provides protection against oxidation systems that generate reactive oxygen and sulfur species
YGR286c BIO2 297
biotin synthase
YBL094c 298
Hypothetical ORF
YMR091c NPL6 298
Nuclear protein that may have a role in nuclear protein import
YBR082c UBC4 298
ubiquitin conjugating enzyme e2
YJR090c GRR1 298
F-box protein component of the SCF ubiquitin-ligase complex, required for Cln1p and Cln2p degradation: involved in carbon catabolite repression, glucose-dependent divalent cation transport, high-affinity glucose transport, and morphogenesis
YPL268w PLC1 298
phosphoinositide-specific phospholipase C
YAL023c PMT2 299
dolichyl phosphate-D-mannose:protein O-D-mannosyltransferase
YNL147w LSM7 299
snRNP protein
YMR179w SPT21 299
non-specific DNA binding protein
YCR094w CDC50 300
Endosomal protein that regulates cell polarity; similar to Ynr048wp and Lem3p
YDR207c UME6 300
Regulator of both repression and induction of early meiotic genes. Ume6p requires Ume4 for mitotic repression and interacts with and requires Ime1p and Rim11p for induction of meiosis-specific transcription: Ume6p is a C6 zinc finger URS1-binding protein.
YMR080c NAM7 301
ATP-dependent RNA helicase of the SFI superfamily, required for nonsense mediated mRNA decay and for efficient translation termination at nonsense codons
YBL016w FUS3 301
Mitogen-activated protein kinase involved in mating pheromone response: activated by phoshporylation by Ste7p: provides specificity during the mating vs. filamentous growth response by phosphorylating transcriptional and cytoplasmic targets
YOL014w 301
Hypothetical ORF
YLR102c APC9 301
anaphase promoting complex (APC) subunit
YDL160c DHH1 302
Cytoplasmic DExD/H-box helicase, stimulates mRNA decapping, coordinates distinct steps in mRNA function and decay, interacts with both the decapping and deadenylase complexes, may have a role in mRNA export and translation
YDL225w SHS1 302
Component of the septin ring of the mother-bud neck that is required for cytokinesis: septins recruit proteins to the neck and can act as a barrier to diffusion at the membrane, and they comprise the 10nm filaments seen with EM
YMR275c BUL1 303
Ubiquitin-binding component of the Rsp5p E3-ubiquitin ligase complex, functional homolog of Bul2p, disruption causes temperature-sensitive growth, overexpression causes missorting of amino acid permeases
YNL298w CLA4 303
Ste20p homolog|protein kinase
YAR023c 303
Putative integral membrane protein, member of DUP240 gene family
YCR009c RVS161 304
Protein required for viability after N, C, or S starvation. The BAR adaptor proteins encoded by RVS167 and RVS161 form a complex that regulates actin, endocytosis, and viability following starvation or osmotic stress.
YDR369c XRS2 305
DNA repair protein
YHR191c CTF8 305
Subunit of a complex with Ctf18p that shares some subunits with Replication Factor C and is required for sister chromatid cohesion
YML014w TRM9 306
mcm5U/mcm5s2U tRNA carboxyl methyltransferase
YLR358c 306
Hypothetical ORF
YER095w RAD51 308
Rad51p colocalizes to ~ 65 spots with Dmc1p prior to synapsis (independently of ZIP1 and DMC1), and interacts with Rad52p and Rad55p; human Rad51p homolog interacts with Brca2 protein which has been implicated in causing breast cancer|RecA homolog
YMR035w IMP2 308
YDR458c 309
Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the nuclear periphery
YDL115c IWR1 309
Interacts with RNA Polymerase II
YPR120c CLB5 309
B-type cyclin
YFL001w DEG1 310
Non-essential tRNA:pseudouridine synthase, introduces pseudouridines at position 38 or 39 in tRNA, important for maintenance of translation efficiency and normal cell growth, localizes to both the nucleus and cytoplasm
YPR087w VPS69 310
Dubious open reading frame, unlikely to encode a protein; not conserved in closely related Saccharomyces species; 85% of ORF overlaps the verified gene SRP54; deletion causes a vacuolar protein sorting defect
YMR185w 311
Protein required for cell viability
YAL042w ERV46 311
Protein localized to COPII-coated vesicles, forms a complex with Erv41p: involved in the membrane fusion stage of transport
YDR138w HPR1 311
Subunit of THO/TREX, related complexes that couple transcription elongation with mitotic recombination and elongation with mRNA metabolism and export, subunit of an RNA Pol II complex; regulates lifespan; similar to Top1p
YKL139w CTK1 312
kinase subunit of RNA polymerase II carboxy-terminal domain kinase I
YNL059c ARP5 312
actin related protein
YDR523c SPS1 312
dispensable for mitosis, involved in middle/late stage of meiosis, required for spore wall formation
YHR015w MIP6 313
RNA-binding protein, interacts with MEX67
YJR055w HIT1 314
Protein of unknown function, required for growth at high temperature
YLR338w 314
Hypothetical ORF
YHL040c ARN1 315
Transporter, member of the ARN family of transporters that specifically recognize siderophore-iron chelates; responsible for uptake of iron bound to ferrirubin, ferrirhodin, and related siderophores
YOR241w MET7 315
Folylpolyglutamate synthetase, catalyzes extension of the glutamate chains of the folate coenzymes, required for methionine synthesis and for maintenance of mitochondrial DNA, present in both the cytoplasm and mitochondria
YIL121w 316
plasma membrane transporter
YJR043c POL32 317
55 kDa|DNA polymerase delta subunit
YDR442w 318
Hypothetical ORF
YLR357w RSC2 318
RSC complex member
YBR101c FES1 320
Hsp70 nucleotide exchange factor
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