SCMD Saccharomyces Cerevisiae Morphological Database
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Keywords: (ex. rad52, polarisome)

Sortable ORF Parameter Sheet

Parameter Name:A9_A1B
Stain Type:Actin
Nucleus Status:A1B
Parameter Type:Average
Description:Ratio of actin region to bud neck on nucleus A1B
Definition:Ratio of actin region to bud neck on nucleus A1B
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ORF Std. Name A9_A1B
YLR295c ATP14 0.500
ATP synthase subunit h
YIR033w MGA2 0.500
ER membrane protein involved, with its homolog Spt23p, in regulation of OLE1 transcription; inactive ER form dimerizes and one subunit is then activated by ubiquitin/proteasome-dependent processing followed by nuclear targeting
YJR091c JSN1 0.500
Member of the Puf family of RNA-binding proteins, interacts with mRNAs encoding membrane-associated proteins: overexpression suppresses a tub2-150 mutation and causes increased sensitivity to benomyl in wild-type cells
YJR092w BUD4 0.500
Protein involved in bud-site selection and required for axial budding pattern; localizes with septins to bud neck in mitosis and may constitute "axial landmark" for next round of budding; potential Cdc28p substrate
YLL060c GTT2 0.500
glutathione transferase
YLR061w RPL22A 0.500
ribosomal protein L22A (L1c) (rp4) (YL31)
YOL163w 0.500
Hypothetical ORF, member of the Dal5p subfamily of the major facilitator family
YHR184w SSP1 0.500
Protein involved in the control of meiotic nuclear division and spore formation
YKR085c MRPL20 0.500
Mitochondrial ribosomal protein of the large subunit
YER170w ADK2 0.500
adenylate kinase|mitochondrial GTP:AMP phosphotransferase
YKL096w CWP1 0.500
Cell wall mannoprotein, linked to a beta-1,3- and beta-1,6-glucan heteropolymer through a phosphodiester bond: involved in cell wall organization
YML095c-A 0.500
This ORF is a part of YML094C-A
YCR027c RHB1 0.500
GTP-binding protein|ras family|Rheb
YDR500c RPL37B 0.500
ribosomal protein L37B (L43) (YL35)
YJL211c 0.500
Hypothetical ORF
YER027c GAL83 0.501
One of three possible beta-subunits of the Snf1 kinase complex, allows nuclear localization of the Snf1 kinase complex in the presence of a nonfermentable carbon source: contains glycogen-binding domain
YFL016c MDJ1 0.501
DnaJ homolog|involved in mitochondrial biogenesis and protein folding
YDR348c 0.501
Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cell periphery and bud neck; potential Cdc28p substrate
YLR214w FRE1 0.501
cupric reductase|ferric reductase
YJR059w PTK2 0.501
Putative serine/threonine protein kinase involved in regulation of ion transport across plasma membrane: enhances spermine uptake
YOR105w 0.501
Hypothetical ORF
YAR002c-A ERP1 0.501
p24 protein involved in membrane trafficking
YBR188c NTC20 0.501
splicing factor
YBL051c PIN4 0.501
Protein involved in G2/M phase progression and response to DNA damage, interacts with Rad53p; contains an RNA recognition motif, a nuclear localization signal, and several SQ/TQ cluster domains; hyperphosphorylated in response to DNA damage
YGR276c RNH70 0.501
ribonuclease H
YLR178c TFS1 0.501
lipid binding protein (putative)|supressor of a cdc25 mutation
YGL195w GCN1 0.501
translational activator of GCN4 through activation of GCN2 in response to starvation
YNL323w LEM3 0.501
Membrane protein of the plasma membrane and ER, involved in translocation of phospholipids and alkylphosphocholine drugs across the plasma membrane
YER106w MAM1 0.501
YGL221c NIF3 0.501
similar to Listeria monocytogenes major sigma factor (rpoD gene product)
YBL044w 0.501
Hypothetical ORF
YFL013c IES1 0.501
Subunit of the INO80 chromatin remodeling complex
YBR245c ISW1 0.501
Member of the imitation-switch (ISWI) class of ATP-dependent chromatin remodeling complexes: ATPase that forms a complex with Ioc2p and Ioc4p to regulate transcription elongation, and a complex with Ioc3p to repress transcription initiation
YFR015c GSY1 0.501
glycogen synthase (UDP-glucose-starch glucosyltransferase)
YKL040c NFU1 0.501
Protein involved in iron metabolism in mitochondria: similar to NifU, which is a protein required for the maturation of the Fe/S clusters of nitrogenase in nitrogen-fixing bacteria
YBR065c ECM2 0.501
Pre-mRNA splicing factor, facilitates the cooperative formation of U2/U6 helix II in association with stem II in the spliceosome, function may be regulated by Slu7p
YMR294w JNM1 0.501
Component of the yeast dynactin complex, consisting of Nip100p, Jnm1p, and Arp1p: required for proper nuclear migration and spindle partitioning during mitotic anaphase B
YHR017w YSC83 0.501
similar to S. douglasii YSD83
YJL110c GZF3 0.501
GATA zinc finger protein and Dal80p homolog that negatively regulates nitrogen catabolic gene expression by competing with Gat1p for GATA site binding: function requires a repressive carbon source: dimerizes with Dal80p and binds to Tor1p
YER047c SAP1 0.501
YNL203c 0.502
Hypothetical ORF
YNL231c PDR16 0.502
Pdr17p homolog|Sec14p homolog
YLR261c VPS63 0.502
Dubious open reading frame, unlikely to encode a protein; not conserved in closely related Saccharomyces species; 98% of ORF overlaps the verified gene YPT6; deletion causes a vacuolar protein sorting defect
YIR009w MSL1 0.502
U2 snRNP component|YU2B''
YJL078c PRY3 0.502
Protein of unknown function, has similarity to Pry1p and Pry2p and to the plant PR-1 class of pathogen related proteins
YJR079w 0.502
Hypothetical ORF
YBR269c 0.502
The authentic, non-tagged protein was localized to the mitochondria
YDL238c 0.502
guanine deaminase
YEL028w 0.502
Hypothetical ORF
YER019w ISC1 0.502
ISC1 encodes phospholipase C type enzyme which hydrolyzes inositolphosphosphingolipids (IPC, MIPC, M(IP)2C) as well as sphingomyelin.
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