SCMD Saccharomyces Cerevisiae Morphological Database
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Keywords: (ex. rad52, polarisome)

Sortable ORF Parameter Sheet

Parameter Name:ACV8-2_C
Stain Type:Actin
Nucleus Status:C
Parameter Type:Coefficient of Variation
Description:Actin region brightness in bud Actin region brightness in bud on nucleus C
Definition:Actin region brightness in bud Actin region brightness in bud on nucleus C
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ORF Std. Name ACV8-2_C
YGR143w SKN1 0.393
highly homologous to Kre6p|type II membrane protein (putative)
YPL187w MF(ALPHA)1 0.395
mating factor alpha
YMR090w 0.395
Hypothetical ORF
YDL186w 0.397
Hypothetical ORF
YPL042c SSN3 0.397
Component of RNA polymerase II holoenzyme, involved in RNA pol II carboxy-terminal domain phosphorylation
YLR338w 0.397
Hypothetical ORF
YDL182w LYS20 0.397
YDL131W (LYS21) homolog|homocitrate synthase
YJL075c 0.397
Dubious open reading frame, unlikely to encode a protein; not conserved in closely related Saccharomyces species; 85% of ORF overlaps the verified gene NET1
YOL162w 0.398
Hypothetical ORF, member of the Dal5p subfamily of the major facilitator family
YJR083c ACF4 0.398
Protein of unknown function, computational analysis of large-scale protein-protein interaction data suggests a possible role in actin cytoskeleton organization; potential Cdc28p substrate
YML073c RPL6A 0.398
N-terminally acetylated protein component of the large (60S) ribosomal subunit, has similarity to Rpl6Bp and to rat L6 ribosomal protein: binds to 5.8S rRNA
YJR139c HOM6 0.398
L-homoserine:NADP oxidoreductase|homoserine dehydrogenase
YLR053c 0.398
Hypothetical ORF
YEL013w VAC8 0.399
Phosphorylated vacuolar membrane protein that interacts with Atg13p, required for the cytoplasm-to-vacuole targeting (Cvt) pathway: interacts with Nvj1p to form nucleus-vacuole junctions
YMR234w RNH1 0.399
ribonuclease H
YML070w DAK1 0.399
dihydroxyacetone kinase (putative)
YJL188c BUD19 0.400
Dubious open reading frame, unlikely to encode a protein; not conserved in closely related Saccharomyces species; 88% of ORF overlaps the verified gene RPL39; diploid mutant displays a weak budding pattern phenotype in a systematic assay
YGR194c XKS1 0.400
YJR015w 0.401
Hypothetical ORF
YLR144c ACF2 0.401
Intracellular beta-1,3-endoglucanase, expression is induced during sporulation; may have a role in in cortical actin cytoskeleton assembly
YOL137w BSC6 0.401
Transcript encoded by this ORF shows a high level of stop codon bypass
YKR033c 0.402
Hypothetical ORF
YPR160w GPH1 0.402
glycogen phosphorylase
YGL027c CWH41 0.402
Processing alpha glucosidase I, involved in assembly of cell wall beta 1,6 glucan and asparagine-linked protein glycosylation: ER type II integral membrane N-glycoprotein: disruption leads to a K1 killer toxin-resistant phenotype
YIL093c RSM25 0.402
mitochondrial ribosome small subunit component
YBL002w HTB2 0.403
histone H2B (HTB1 and HTB2 code for nearly identical proteins)
YGR262c BUD32 0.404
Protein involved in bud-site selection: diploid mutants display a random budding pattern instead of the wild-type bipolar pattern
YDR204w COQ4 0.404
encodes component of the coenzyme Q biosynthetic pathway
YLR377c FBP1 0.404
YJR090c GRR1 0.404
F-box protein component of the SCF ubiquitin-ligase complex, required for Cln1p and Cln2p degradation: involved in carbon catabolite repression, glucose-dependent divalent cation transport, high-affinity glucose transport, and morphogenesis
YML022w APT1 0.404
adenine phosphoribosyltransferase
YOR280c FSH3 0.404
Serine hydrolase that localizes to both the nucleus and cytoplasm. Sequence similary to Fsh1p and Fsh3p
YOL117w RRI2 0.405
COP9 signalosome (CSN) subunit
YKL179c COY1 0.405
Golgi membrane protein with similarity to mammalian CASP; genetic interactions with GOS1 (encoding a Golgi snare protein) suggest a role in Golgi function
YAR028w 0.405
Putative integral membrane protein, member of DUP240 gene family
YKL143w LTV1 0.406
Protein required for growth at low temperature
YPL030w 0.406
Hypothetical ORF
YJL210w PEX2 0.407
CH3HC4 zinc-binding integral peroxisomal membrane protein
YFL056c AAD6 0.407
aryl-alcohol dehydrogenase (putative)
YDR364c CDC40 0.408
Pre-mRNA splicing factor, important for catalytic step II of pre-mRNA splicing and plays a role in cell cycle progression: required for DNA synthesis during mitosis and meiosis: has WD repeats
YOR295w UAF30 0.408
Topoisomerase 1 and RAD52 epistasis group Interactions
YPR116w 0.408
Hypothetical ORF
YAL042w ERV46 0.408
Protein localized to COPII-coated vesicles, forms a complex with Erv41p: involved in the membrane fusion stage of transport
YDR109c 0.409
Hypothetical ORF
YHL033c RPL8A 0.410
Ribosomal protein L4 of the large (60S) ribosomal subunit, nearly identical to Rpl8Bp and has similarity to rat L7a ribosomal protein: mutation results in decreased amounts of free 60S subunits
YGR162w TIF4631 0.410
150 kDa subunit|Tif4632p and mammalian p220 homolog|mRNA cap binding protein eIF-4F
YHR171w ATG7 0.410
Autophagy-related protein that is a member of the E1 family of ubiquitin-activating enzymes: mediates the conjugation of Atg12p with Atg5p, a required step in the formation of autophagosomes
YOL039w RPP2A 0.410
60S acidic ribosomal protein P2A (L44) (A2) (YP2alpha)
YLR114c 0.411
PHO85 Requiring
YJL066c MPM1 0.411
mitochondrial membrane protein
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