SCMD Saccharomyces Cerevisiae Morphological Database
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Keywords: (ex. rad52, polarisome)

Sortable ORF Parameter Sheet

Parameter Name:DCV16-3_A1B
Stain Type:Nucleus
Nucleus Status:A1B
Parameter Type:Coefficient of Variation
Description:Maximum brightness of nuclei
Definition:Maximum brightness of nuclei
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ORF Std. Name DCV16-3_A1B
YDR136c VPS61 0.184
Dubious open reading frame, unlikely to encode a protein; not conserved in closely related Saccharomyces species; 4% of ORF overlaps the verified gene RGP1; deletion causes a vacuolar protein sorting defect
YIL113w SDP1 0.184
YDR409w SIZ1 0.184
SUMO ligase that promotes the attachment of sumo (Smt3p: small ubiquitin-related modifier) to proteins: binds Ubc9p and may bind septins: specifically required for sumoylation of septins in vivo: localized to the septin ring
YCR036w RBK1 0.184
ribokinase
YER106w MAM1 0.184
Monopolin
YNL288w CAF40 0.184
CCR4 Associated Factor 40 kDa
YDL169c UGX2 0.184
Protein of unknown function
YER184c 0.185
Hypothetical ORF
YGR108w CLB1 0.185
B-type cyclin
YDL168w SFA1 0.185
Long-chain alcohol dehydrogenase (glutathione-dependent formaldehyde dehydrogenase)
YDR057w YOS9 0.185
membrane-associated glycoprotein
YDR193w 0.185
Hypothetical ORF
YBL045c COR1 0.185
coenzyme QH2 cytochrome c reductase 44 kDa core protein subunit
YGL176c 0.185
Hypothetical ORF
YLR422w 0.186
Hypothetical ORF
YFR039c 0.186
Hypothetical ORF
YOR037w CYC2 0.187
Mitochondrial protein required for normal abundance of mitochondrial cytochrome c (Cyc1p) and for mitochondrial osmotic stability; may be involved in regulating the activity of cytochrome c heme lyase (Cyc3p); potential Cdc28p substrate
YPL004c LSP1 0.187
Long chain base-responsive inhibitor of protein kinases Phk1p and Phk2p, acts along with Pil1p to down-regulate heat stress resistance via regulation of the Pkc1p and Ypk1p pathways; phosphorylated by Phk1p and Phk2p
YMR070w MOT3 0.187
Nuclear transcription factor with two Cys2-His2 zinc fingers: involved in repression of a subset of hypoxic genes by Rox1p, repression of several DAN/TIR genes during aerobic growth, and repression of ergosterol biosynthetic genes
YMR080c NAM7 0.187
ATP-dependent RNA helicase of the SFI superfamily, required for nonsense mediated mRNA decay and for efficient translation termination at nonsense codons
YNL211c 0.187
Hypothetical ORF
YGR100w MDR1 0.187
GTPase activating protein (GAP) for Ypt6
YBR301w DAN3 0.188
putative cell wall protein
YDR290w 0.188
Dubious open reading frame, unlikely to encode a protein; not conserved in closely related Saccharomyces species; 42% of ORF overlaps the verified gene RTT103; deletion causes hydroxyuracil sensitivity
YGL053w PRM8 0.189
Pheromone-regulated protein with 2 predicted transmembrane segments and an FF sequence, a motif involved in COPII binding; forms a complex with Prp9p in the ER
YNL146w 0.190
Hypothetical ORF
YGL230c 0.191
Hypothetical ORF
YGL027c CWH41 0.191
Processing alpha glucosidase I, involved in assembly of cell wall beta 1,6 glucan and asparagine-linked protein glycosylation: ER type II integral membrane N-glycoprotein: disruption leads to a K1 killer toxin-resistant phenotype
YGR171c MSM1 0.191
methionine-tRNA ligase
YCR102w-A 0.191
Similar to several yeast probable membrane proteins, including YNR075W and YFL062W
YNL023c FAP1 0.191
transcription factor homolog; similarity to Drosophila melanogaster shuttle craft protein; similarity to human NFX1 protein; similarity to human DNA-binding protein tenascin
YFR044c 0.191
Hypothetical ORF
YGR133w PEX4 0.191
ubiquitin-conjugating protein family
YGR072w UPF3 0.192
Component of the nonsense-mediated mRNA decay (NMD) pathway, along with Nam7p and Nmd2p: involved in decay of mRNA containing nonsense codons
YBR270c 0.192
Hypothetical ORF
YDR216w ADR1 0.192
positive transcriptional regulator
YGL220w 0.192
Hypothetical ORF
YKR093w PTR2 0.193
peptide transporter
YPL005w AEP3 0.193
Peripheral mitochondrial inner membrane protein, located on the matrix face of the membrane; stabilizes the bicistronic AAP1-ATP6 mRNA encoding subunits 6 and 8 of the ATP synthase complex
YPR163c TIF3 0.193
translation initiation factor eIF-4B
YJR137c ECM17 0.193
Sulfite reductase beta subunit, involved in amino acid biosynthesis, transcription repressed by methionine
YGR250c 0.193
Hypothetical ORF
YLL046c RNP1 0.193
RNA binding protein (putative)
YGL221c NIF3 0.193
similar to Listeria monocytogenes major sigma factor (rpoD gene product)
YNL040w 0.193
Hypothetical ORF
YNL159c ASI2 0.193
Predicted membrane protein; genetic interactions suggest a role in negative regulation of amino acid uptake
YGR007w MUQ1 0.194
Choline phosphate cytidylyltransferase, catalyzes the second step of phosphatidylethanolamine biosynthesis: involved in the maintenance of plasma membrane: similar to mammalian CTP: phosphocholine cytidylyl-transferases
YDL224c WHI4 0.194
RNA binding protein (putative)|WHI3 homolog
YMR120c ADE17 0.194
5-aminoimidazole-4-carboxamide ribonucleotide (AICAR) transformylase/IMP cyclohydrolase
YDR162c NBP2 0.194
interacts with Nap1, which is involved in histone assembly
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