SCMD Saccharomyces Cerevisiae Morphological Database
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Keywords: (ex. rad52, polarisome)

Sortable ORF Parameter Sheet

Parameter Name:A106_A
Stain Type:Actin
Nucleus Status:A
Parameter Type:Average
Description:Actin B ratio on nucleus A
Definition:Actin B ratio on nucleus A
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ORF Std. Name A106_A
YDR458c 0.296
Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the nuclear periphery
YDR392w SPT3 0.298
histone acetyltransferase SAGA complex member|transcription factor
YIR021w MRS1 0.298
Protein required for the splicing of two mitochondrial group I introns (BI3 in COB and AI5beta in COX1); forms a splicing complex, containing four subunits of Mrs1p and two subunits of the BI3-encoded maturase, that binds to the BI3 RNA
YOL148c SPT20 0.3
histone acetyltransferase SAGA complex member|transcription factor
YDL075w RPL31A 0.303
Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl31Bp and has similarity to rat L31 ribosomal protein: associates with the karyopherin Sxm1p
YPL084w BRO1 0.305
Cytoplasmic class E vacuolar protein sorting (VPS) factor that coordinates deubiquitination in the multivesicular body (MVB) pathway by recruiting Doa4p to endosomes
YDR470c UGO1 0.309
outer membrane protein
YBL100c 0.311
Dubious open reading frame
YOR078w BUD21 0.311
Component of small ribosomal subunit (SSU) processosome that contains U3 snoRNA: originally isolated as bud-site selection mutant that displays a random budding pattern
YIL087c 0.312
Hypothetical ORF
YMR280c CAT8 0.312
zinc-cluster protein involved in activating gluconeogenic genes; related to Gal4p
YDR300c PRO1 0.313
gamma-glutamyl kinase
YNL236w SIN4 0.314
involved in positive and negative regualtion of transcription, possibly via changes in chromatin structure: regulation of YGP1 expression: component of RNA polymerase II holoenzyme/mediator complex
YHR035w 0.314
Hypothetical ORF
YMR231w PEP5 0.317
Zn-finger protein (putative)
YLR151c PCD1 0.317
coenzyme A diphosphatase
YMR207c HFA1 0.317
Mitochondrial acetyl-coenzyme A carboxylase, catalyzes the production of malonyl-CoA in mitochondrial fatty acid biosynthesis
YHR022c 0.317
Hypothetical ORF
YAL005c SSA1 0.317
heat shock protein of HSP70 family
YHR129c ARP1 0.318
Actin-related protein of the dynactin complex: required for spindle orientation and nuclear migration: putative ortholog of mammalian centractin
YJR122w CAF17 0.318
CCR4 transcriptional complex component
YJL209w CBP1 0.320
Protein required for COB mRNA stability or 5' processing. required for translation of COB RNAs.
YKL208w CBT1 0.321
Subunit of complex involved in processing of the 3' end of cytochrome b pre-mRNA
YBR267w REI1 0.326
Protein of unknown function involved in bud growth in the mitotic signaling network; proposed negative regulator of Swe1p and Gin4p; contains dispersed C2H2 zinc finger domains
YGL206c CHC1 0.327
vesicle coat protein: presumed vesicle coat protein
YGL058w RAD6 0.330
ubiquitin-conjugating enzyme
YLR423c ATG17 0.330
Protein that interacts with and is required for activation of Apg1p protein kinase: involved in autophagy but not in the Cvt (cytoplasm to vacuole targeting) pathway
YDL005c MED2 0.330
RNA polymerase II holoenzyme/mediator subunit
YKR013w PRY2 0.331
Protein of unknown function, has similarity to Pry1p and Pry3p and to the plant PR-1 class of pathogen related proteins
YLR334c 0.333
Hypothetical ORF
YHL040c ARN1 0.333
Transporter, member of the ARN family of transporters that specifically recognize siderophore-iron chelates; responsible for uptake of iron bound to ferrirubin, ferrirhodin, and related siderophores
YHR194w MDM31 0.335
Mitochondrial Distribution and Morphology
YDR465c RMT2 0.336
arginine methyltransferase
YHL029c 0.336
Hypothetical ORF
YIL090w 0.337
Hypothetical ORF
YPL042c SSN3 0.338
Component of RNA polymerase II holoenzyme, involved in RNA pol II carboxy-terminal domain phosphorylation
YOL012c HTZ1 0.339
evolutionarily conserved member of the histone H2A F/Z family of histone variants
YKL085w MDH1 0.341
malate dehydrogenase
YDR441c APT2 0.341
Apparent pseudogene, not transcribed or translated under normal conditions; encodes a protein with similarity to adenine phosphoribosyltransferase, but artificially expressed protein exhibits no enzymatic activity
YGL024w 0.342
YOL041c NOP12 0.342
Nucleolar protein, required for pre-25S rRNA processing; contains an RNA recognition motif (RRM) and has similarity to Nop13p, Nsr1p, and putative orthologs in Drosophila and S. pombe
YNL147w LSM7 0.343
snRNP protein
YAR023c 0.346
Putative integral membrane protein, member of DUP240 gene family
YMR193w MRPL24 0.347
Mitochondrial ribosomal protein of the large subunit
YLR331c 0.347
Dubious open reading frame, unlikely to encode a protein; not conserved in closely related Saccharomyces species; 98% of ORF overlaps the verified gene MID2
YDR388w RVS167 0.347
cytoskeletal protein (putative)
YJR015w 0.347
Hypothetical ORF
YHL005c 0.348
Hypothetical ORF
YHR120w MSH1 0.348
mutS homolog
YMR238w DFG5 0.349
Mannosidase, essential glycosylphosphatidylinositol (GPI)-anchored membrane protein required for cell wall biogenesis, involved in filamentous growth, homologous to Dcw1p
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