SCMD Saccharomyces Cerevisiae Morphological Database
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Keywords: (ex. rad52, polarisome)

Sortable ORF Parameter Sheet

Parameter Name:D199
Stain Type:Nucleus
Nucleus Status:none
Parameter Type:Average
Description:Ratio of A (Nuclear)
Definition:Ratio of A (Nuclear)
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ORF Std. Name D199
YLR399c BDF1 0.220
Required for sporulation, possible component of chromatin; affects synthesis of snRNA
YBL039c URA7 0.222
CTP synthase
YLR338w 0.223
Hypothetical ORF
YER096w SHC1 0.223
Sporulation-specific activator of Chs3p (chitin synthase III), required for the synthesis of the chitosan layer of ascospores; has similarity to Skt5p, which activates Chs3p during vegetative growth; transcriptionally induced at alkaline pH
YDR392w SPT3 0.225
histone acetyltransferase SAGA complex member|transcription factor
YOR323c PRO2 0.227
gamma-glutamyl phosphate reductase
YGL167c PMR1 0.230
Ca2+ ATPase
YCL016c DCC1 0.230
Defective in sister Chromatid Cohesion
YPR038w 0.231
Hypothetical ORF
YBL094c 0.233
Hypothetical ORF
YLR055c SPT8 0.233
probable member of histone acetyltransferase SAGA complex|transcription factor
YDR245w MNN10 0.236
Subunit of a Golgi mannosyltransferase complex also containing Anp1p, Mnn9p, Mnn11p, and Hoc1p that mediates elongation of the polysaccharide mannan backbone: membrane protein of the mannosyltransferase family
YNL095c 0.236
Hypothetical ORF
YOR198c BFR1 0.237
Multicopy suppressor of BFA (Brefeldin A)-induced lethality; implicated in secretion and nuclear segregation
YOR188w MSB1 0.238
Protein involved in positive requlation of both 1,3-beta-glucan synthesis and the Pkc1p-MAPK pathway, potential Cdc28p substrate; multicopy suppressor of temperature-sensitive mutations in CDC24 and CDC42, and of mutations in BEM4
YML109w ZDS2 0.239
Protein that interacts with silencing proteins at the telomere, involved in transcriptional silencing; paralog of Zds1p
YGR036c CAX4 0.240
contains 3 short stretches of amino acids that are characteristic for a wide variety of phosphatases, including lipid phosphatases and a protein phosphatase
YML028w TSA1 0.241
Thioredoxin-peroxidase (TPx), reduces H2O2 and alkyl hydroperoxides with the use of hydrogens provided by thioredoxin, thioredoxin reductase, and NADPH: provides protection against oxidation systems that generate reactive oxygen and sulfur species
YDR025w RPS11A 0.241
ribosomal protein S11A (S18A) (rp41A) (YS12)
YHL032c GUT1 0.242
converts glycerol to glycerol-3-phosphate|glyerol kinase
YKL054c DEF1 0.243
Rad26-interacting protein
YBR009c HHF1 0.244
histone H4 (HHF1 and HHF2 code for identical proteins)
YOR214c 0.244
Hypothetical ORF
YDR532c 0.244
Protein of unknown function that localizes to the nuclear side of the spindle pole body and along short spindles; forms a complex with Spc105p
YLR006c SSK1 0.246
two-component signal transducer that with Sln1p regulates osmosensing MAP kinase cascade(suppressor of sensor kinase)
YOR252w 0.246
Hypothetical ORF
YLR268w SEC22 0.246
Identified in a screen for dense cells that accumulated invertase at the non-permissive temperature, SEC22 encodes a v-SNARE present on ER to Golgi vesicles and is involved in anterograde and retrograde transport between the ER and Golgi
YIL159w BNR1 0.246
Formin, nucleates the formation of linear actin filaments, involved in cell processes such as budding and mitotic spindle orientation which require the formation of polarized actin cables, functionally redundant with BNI1
YPL129w TAF14 0.247
Subunit (30 kDa) of TFIID, TFIIF, and SWI/SNF complexes, involved in RNA polymerase II transcription initiation and in chromatin modification, contains a YEATS domain
YOL004w SIN3 0.247
DNA binding protein involved in transcriptional regulation
YPL089c RLM1 0.247
serum response factor-like protein that may function downstream of MPK1 (SLT2) MAP-kinase pathway
YER045c ACA1 0.247
Basic leucine zipper (bZIP) transcription factor of the ATF/CREB family, may regulate transcription of genes involved in utilization of non-optimal carbon sources
YBR046c ZTA1 0.248
Zeta-crystallin homolog, found in the cytoplasm and nucleus; has similarity to E. coli quinone oxidoreductase and to human zeta-crystallin, which has quinone oxidoreductase activity
YMR100w MUB1 0.248
Homolog of samB gene of Aspergillus nidulans (deletion of samB results in mislocalization of septa
YBL053w 0.249
Hypothetical ORF
YPR164w MMS1 0.249
Protein likely involved in protection against replication-dependent DNA damage: mutants are sensitive to methyl methanesulfonate (MMS): implicated in regulation of Ty1 transposition
YMR198w CIK1 0.25
Kar3-binding protein
YGL163c RAD54 0.25
DNA-dependent ATPase, stimulates strand exchange by modifying the topology of double-stranded DNA; involved in the recombinational repair of double-strand breaks in DNA during vegetative growth and meiosis; member of the SWI/SNF family
YDR534c FIT1 0.251
Cell wall protein involved in iron uptake
YGR180c RNR4 0.251
Ribonucleotide-diphosphate reductase (RNR), small subunit: the RNR complex catalyzes the rate-limiting step in dNTP synthesis and is regulated by DNA replication and DNA damage checkpoint pathways via localization of the small subunits
YGR167w CLC1 0.252
clathrin light chain
YBR277c 0.252
Hypothetical ORF
YPR058w YMC1 0.253
Putative mitochondrial inner membrane transporter, member of the mitochondrial carrier (MCF) family
YLR144c ACF2 0.254
Intracellular beta-1,3-endoglucanase, expression is induced during sporulation; may have a role in in cortical actin cytoskeleton assembly
YGR014w MSB2 0.254
integral membrane protein (putative)
YNL066w SUN4 0.254
Protein involved in the aging process: related to glucanases
YDR138w HPR1 0.255
Subunit of THO/TREX, related complexes that couple transcription elongation with mitotic recombination and elongation with mRNA metabolism and export, subunit of an RNA Pol II complex; regulates lifespan; similar to Top1p
YDL020c RPN4 0.256
Transcription factor that stimulates expression of proteasome genes: Rpn4p levels are in turn regulated by the 26S proteasome in a negative feedback control mechanism: RPN4 is transcriptionally regulated by various stress responses
YMR038c LYS7 0.256
copper chaperone
YOL009c MDM12 0.256
mitochondrial outer membrane protein. An Mdm12p homolog exists in S. Pombe which confers a dominant negative phenotype when expressed in S. cerevisiae
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