SCMD Saccharomyces Cerevisiae Morphological Database
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Keywords: (ex. rad52, polarisome)

Sortable ORF Parameter Sheet

Parameter Name:DCV15-3_A1B
Stain Type:Nucleus
Nucleus Status:A1B
Parameter Type:Coefficient of Variation
Description:Sum of brightness in nucleus region in nucleus A1B
Definition:Sum of brightness in nucleus region in nucleus A1B
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ORF Std. Name DCV15-3_A1B
YDR197w CBS2 0.113
cytochrome b translational activator
YMR025w CSI1 0.122
Interactor with COP9 signalosome (CSN) complex
YDR469w SDC1 0.122
compass (complex proteins associated with Set1p) component
YGL053w PRM8 0.122
Pheromone-regulated protein with 2 predicted transmembrane segments and an FF sequence, a motif involved in COPII binding; forms a complex with Prp9p in the ER
YGL043w DST1 0.123
General transcription elongation factor TFIIS, enables RNA polymerase II to read through blocks to elongation by stimulating cleavage of nascent transcripts stalled at transcription arrest sites
YNR037c RSM19 0.131
mitochondrial ribosome small subunit component
YCR036w RBK1 0.131
ribokinase
YFR044c 0.137
Hypothetical ORF
YCR098c GIT1 0.137
permease involved in the uptake of glycerophosphoinositol (GroPIns)
YMR080c NAM7 0.138
ATP-dependent RNA helicase of the SFI superfamily, required for nonsense mediated mRNA decay and for efficient translation termination at nonsense codons
YBR272c HSM3 0.138
Protein of unknown function, involved in DNA mismatch repair during slow growth; has weak similarity to Msh1p
YNL041c COG6 0.139
Component of the conserved oligomeric Golgi complex; interacts with Cog2p
YFR039c 0.139
Hypothetical ORF
YBR169c SSE2 0.140
HSP70 family|SSE1 homolog
YDR136c VPS61 0.142
Dubious open reading frame, unlikely to encode a protein; not conserved in closely related Saccharomyces species; 4% of ORF overlaps the verified gene RGP1; deletion causes a vacuolar protein sorting defect
YMR069w NAT4 0.142
N-alpha acetyltransferase
YNL023c FAP1 0.143
transcription factor homolog; similarity to Drosophila melanogaster shuttle craft protein; similarity to human NFX1 protein; similarity to human DNA-binding protein tenascin
YLR133w CKI1 0.144
choline kinase
YKR039w GAP1 0.144
general amino acid permease
YDR213w UPC2 0.146
involved in sterol uptake: zinc finger transcription factor of the Zn(2)-Cys(6) binuclear cluster domain type
YCR100c 0.146
Hypothetical ORF
YGL013c PDR1 0.147
zinc finger transcription factor of the Zn(2)-Cys(6) binuclear cluster domain type
YPL207w 0.148
Hypothetical ORF
YDR409w SIZ1 0.148
SUMO ligase that promotes the attachment of sumo (Smt3p: small ubiquitin-related modifier) to proteins: binds Ubc9p and may bind septins: specifically required for sumoylation of septins in vivo: localized to the septin ring
YGL196w 0.148
Hypothetical ORF
YJL141c YAK1 0.148
Serine-threonine protein kinase
YBR023c CHS3 0.148
Chitin synthase III, catalyzes the transfer of N-acetylglucosamine (GlcNAc) to chitin: required for synthesis of the majority of cell wall chitin, the chitin ring during bud emergence, and spore wall chitosan
YNL191w 0.149
Hypothetical ORF
YKR104w 0.149
ORFs YKR103W and YKR104W are merged in different strain backgrounds
YLR432w IMD3 0.149
IMP dehydrogenase homolog
YER184c 0.149
Hypothetical ORF
YOR037w CYC2 0.150
Mitochondrial protein required for normal abundance of mitochondrial cytochrome c (Cyc1p) and for mitochondrial osmotic stability; may be involved in regulating the activity of cytochrome c heme lyase (Cyc3p); potential Cdc28p substrate
YNR061c 0.150
Hypothetical ORF
YFR045w 0.150
Hypothetical ORF
YNR021w 0.151
Hypothetical ORF
YGR087c PDC6 0.152
pyruvate decarboxylase isozyme
YJL108c PRM10 0.152
Pheromone-regulated protein, predicted to have 5 transmembrane segments
YHL044w 0.152
Putative integral membrane protein, member of DUP240 gene family; green fluorescent protein (GFP)-fusion protein localizes to the plasma membrane in a punctate pattern
YBR294w SUL1 0.152
High affinity sulfate permease: sulfate uptake is mediated by specific sulfate transporters Sul1p and Sul2p, which control the concentration of endogenous activated sulfate intermediates
YNR009w 0.152
Hypothetical ORF
YBR301w DAN3 0.154
putative cell wall protein
YGL054c ERV14 0.154
14 kDa protein found on ER-derived vesicles
YBR285w 0.155
Hypothetical ORF
YNL213c 0.155
Hypothetical ORF
YPL200w CSM4 0.155
Protein required for accurate chromosome segregation during meiosis
YER106w MAM1 0.156
Monopolin
YGR043c 0.156
Hypothetical ORF
YGR194c XKS1 0.157
xylulokinase
YNL211c 0.157
Hypothetical ORF
YHR126c 0.157
Hypothetical ORF
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