SCMD Saccharomyces Cerevisiae Morphological Database
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Keywords: (ex. rad52, polarisome)

Sortable ORF Parameter Sheet

Parameter Name:DCV105_A
Stain Type:Nucleus
Nucleus Status:A
Parameter Type:Coefficient of Variation
Description:Ratio of D102 to C103 in nucleus A
Definition:Ratio of D102 to C103 in nucleus A
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ORF Std. Name DCV105_A
YPR135w CTF4 0.0621
DNA polymerase alpha binding protein
YJL075c 0.0639
Dubious open reading frame, unlikely to encode a protein; not conserved in closely related Saccharomyces species; 85% of ORF overlaps the verified gene NET1
YML028w TSA1 0.0639
Thioredoxin-peroxidase (TPx), reduces H2O2 and alkyl hydroperoxides with the use of hydrogens provided by thioredoxin, thioredoxin reductase, and NADPH: provides protection against oxidation systems that generate reactive oxygen and sulfur species
YGL038c OCH1 0.0641
Mannosyltransferase of the cis-Golgi apparatus, initiates the polymannose outer chain elongation of N-linked oligosaccharides of glycoproteins
YMR307w GAS1 0.0651
Beta-1.3-glucanosyltransferase, required for cell wall assembly: localizes to the cell surface via a glycosylphosphatidylinositol (GPI) anchor
YDL021w GPM2 0.0657
Similar to GPM1 (phosphoglycerate mutase); converts 3-phosphoglycerate to 2-phosphoglycerate in glycolysis
YOL148c SPT20 0.0679
histone acetyltransferase SAGA complex member|transcription factor
YBL007c SLA1 0.0700
cytoskeletal protein binding protein
YBR021w FUR4 0.0703
uracil permease
YGL223c COG1 0.0711
Component of the conserved oligomeric Golgi complex; interacts with Cog2p
YMR052c-A 0.0714
Hypothetical ORF
YBL098w BNA4 0.0715
Kynurenine 3-mono oxygenase
YER007w PAC2 0.0717
tubulin folding cofactor E
YGL067w NPY1 0.0719
NADH pyrophosphatase 1
YML068w ITT1 0.0721
Protein that modulates the efficiency of translation termination, interacts with translation release factors eRF1 (Sup45p) and eRF3 (Sup35p) in vitro, contains a zinc finger domain characteristic of the TRIAD class of proteins
YBR219c 0.0722
Hypothetical ORF
YLL049w 0.0724
Hypothetical ORF
YDL020c RPN4 0.0726
Transcription factor that stimulates expression of proteasome genes: Rpn4p levels are in turn regulated by the 26S proteasome in a negative feedback control mechanism: RPN4 is transcriptionally regulated by various stress responses
YMR273c ZDS1 0.0726
Protein that interacts with silencing proteins at the telomere, involved in transcriptional silencing; also has a role in localization of Bcy1p, which is a regulatory subunit of protein kinase A; paralog of Zds2p
YOL117w RRI2 0.0727
COP9 signalosome (CSN) subunit
YDL002c NHP10 0.0730
Protein related to mammalian high mobility group proteins: likely component of the INO80 complex, which is an ATP-dependent chromatin-remodeling complex
YGR261c APL6 0.0732
beta3-like subunit of the yeast AP-3 complex which functions in transport of alkaline phosphatase to the vacuole via the alternate pathway, suppressor of loss of casein kinase 1 function: putative beta adaptin component of the membrane-associate clathrin assembly complex
YGL206c CHC1 0.0733
vesicle coat protein: presumed vesicle coat protein
YOL118c 0.0735
Hypothetical ORF
YMR083w ADH3 0.0736
alcohol dehydrogenase isoenzyme III
YLR338w 0.0737
Hypothetical ORF
YPL246c RBD2 0.0739
rhomboid protease
YMR224c MRE11 0.0740
Subunit of a complex with Rad50p and Xrs2p (RMX complex) that functions in repair of DNA double-strand breaks and in telomere stability, exhibits nuclease activity that appears to be required for RMX function: widely conserved
YBR173c UMP1 0.0740
20S proteasome maturation factor
YPR076w 0.0742
Hypothetical ORF
YMR090w 0.0744
Hypothetical ORF
YPL115c BEM3 0.0746
rho GTPase activating protein (GAP)
YML012w ERV25 0.0746
vesicle coat component
YPL045w VPS16 0.0746
Vacuolar sorting protein
YPL203w TPK2 0.0747
Involved in nutrient control of cell growth and division: cAMP-dependent protein kinase catalytic subunit
YOL070c 0.0747
Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cell periphery, cytoplasm, and bud neck; potential Cdc28p substrate
YBR085w AAC3 0.0748
Mitochondrial inner membrane ADP/ATP translocator, exchanges cytosolic ADP for mitochondrially synthesized ATP: expressed under anaerobic conditions: similar to Pet9p and Aac1p: has roles in maintenance of viability and in respiration
YOL122c SMF1 0.0748
plasma membrane/mitochondrial membrane protein
YER116c SLX8 0.0749
Protein containing a RING finger domain that forms a complex with Hex3p; mutant phenotypes and genetic interactions suggest a possible role in resolving recombination intermediates during DNA replication or repair
YOR363c PIP2 0.0749
transcription factor
YPL195w APL5 0.0750
Delta-like subunit of the yeast AP-3 complex which functions in transport of alkaline phosphatase to the vacuole via the alternate pathway, suppressor of loss of casein kinase 1 function: delta-like subunit of the yeast AP-3 adaptin component of the membrane-associated clathrin assembly complex
YOR327c SNC2 0.0751
vesicle-associated membrane protein (synaptobrevin) homolog
YDL013w HEX3 0.0751
Ring finger protein involved in the DNA damage response with possible recombination role: genetically identified by synthetic lethality with SGS1 (DNA helicase) and TOP3 (DNA topoisomerase): sporulation role: interacts with Slx8p and Lin1p
YIL009w FAA3 0.0754
acyl-CoA synthase
YGL084c GUP1 0.0754
glycerol transporter (putative)
YPR073c LTP1 0.0755
18 kDa phosphotyrosine phosphatase
YAL058c-A 0.0757
This ORF is a part of YAL056C-A
YLR218c 0.0759
Hypothetical ORF
YMR231w PEP5 0.0760
Zn-finger protein (putative)
YKL085w MDH1 0.0760
malate dehydrogenase
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