SCMD Saccharomyces Cerevisiae Morphological Database
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Keywords: (ex. rad52, polarisome)

Sortable ORF Parameter Sheet

Parameter Name:DCV16-1_A
Stain Type:Nucleus
Nucleus Status:A
Parameter Type:Coefficient of Variation
Description:Maximum brightness of a nucleus in the mother cell
Definition:Maximum brightness of a nucleus in the mother cell
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ORF Std. Name DCV16-1_A
YIL067c 0.144
Hypothetical ORF
YER019w ISC1 0.148
ISC1 encodes phospholipase C type enzyme which hydrolyzes inositolphosphosphingolipids (IPC, MIPC, M(IP)2C) as well as sphingomyelin.
YMR025w CSI1 0.155
Interactor with COP9 signalosome (CSN) complex
YCR002c CDC10 0.162
YML032c RAD52 0.188
Protein that stimulates strand exchange by facilitating Rad51p binding to single-stranded DNA; anneals complementary single-stranded DNA; involved in the repair of double-strand breaks in DNA during vegetative growth and meiosis
YHL044w 0.193
Putative integral membrane protein, member of DUP240 gene family; green fluorescent protein (GFP)-fusion protein localizes to the plasma membrane in a punctate pattern
YMR100w MUB1 0.196
Homolog of samB gene of Aspergillus nidulans (deletion of samB results in mislocalization of septa
YDR290w 0.196
Dubious open reading frame, unlikely to encode a protein; not conserved in closely related Saccharomyces species; 42% of ORF overlaps the verified gene RTT103; deletion causes hydroxyuracil sensitivity
YLR453c RIF2 0.196
nuclear protein
YOR241w MET7 0.197
Folylpolyglutamate synthetase, catalyzes extension of the glutamate chains of the folate coenzymes, required for methionine synthesis and for maintenance of mitochondrial DNA, present in both the cytoplasm and mitochondria
YDL167c NRP1 0.200
Protein of unknown function, rich in asparagine residues
YJL177w RPL17B 0.200
ribosomal protein L17B (L20B) (YL17)
YNR037c RSM19 0.202
mitochondrial ribosome small subunit component
YNL198c 0.203
Hypothetical ORF
YDR097c MSH6 0.204
human GTBP protein homolog
YBR169c SSE2 0.205
HSP70 family|SSE1 homolog
YER096w SHC1 0.205
Sporulation-specific activator of Chs3p (chitin synthase III), required for the synthesis of the chitosan layer of ascospores; has similarity to Skt5p, which activates Chs3p during vegetative growth; transcriptionally induced at alkaline pH
YGL010w 0.205
Hypothetical ORF
YDR490c PKH1 0.205
Pkb-activating Kinase Homologue
YBR270c 0.207
Hypothetical ORF
YFR047c BNA6 0.207
Quinolinate phosphoribosyl transferase, required for biosynthesis of nicotinic acid from tryptophan via kynurenine pathway
YER068w MOT2 0.207
Component of the CCR4-NOT transcription regulatory complex, which represses transcription, at least in part, by inhibiting functional TBP-DNA interactions and also aids in transcription elongation: interacts with C-terminal region of Not1p
YKL069w 0.209
Hypothetical ORF
YBL051c PIN4 0.210
Protein involved in G2/M phase progression and response to DNA damage, interacts with Rad53p; contains an RNA recognition motif, a nuclear localization signal, and several SQ/TQ cluster domains; hyperphosphorylated in response to DNA damage
YDR463w STP1 0.211
Transcription factor, activated by proteolytic processing in response to signals from the SPS sensor system for external amino acids: activates transcription of amino acid permease genes and may have a role in tRNA processing
YPR163c TIF3 0.211
translation initiation factor eIF-4B
YNL146w 0.211
Hypothetical ORF
YLL051c FRE6 0.211
Putative ferric reductase with similarity to Fre2p; expression induced by low iron levels
YGR072w UPF3 0.212
Component of the nonsense-mediated mRNA decay (NMD) pathway, along with Nam7p and Nmd2p: involved in decay of mRNA containing nonsense codons
YGL054c ERV14 0.213
14 kDa protein found on ER-derived vesicles
YKL015w PUT3 0.217
zinc finger transcription factor of the Zn(2)-Cys(6) binuclear cluster domain type
YLR262c-A 0.217
Similar to C. elegans protein
YOR037w CYC2 0.217
Mitochondrial protein required for normal abundance of mitochondrial cytochrome c (Cyc1p) and for mitochondrial osmotic stability; may be involved in regulating the activity of cytochrome c heme lyase (Cyc3p); potential Cdc28p substrate
YIL052c RPL34B 0.217
ribosomal protein L34B
YMR058w FET3 0.217
multicopper oxidase
YOR214c 0.218
Hypothetical ORF
YLR144c ACF2 0.218
Intracellular beta-1,3-endoglucanase, expression is induced during sporulation; may have a role in in cortical actin cytoskeleton assembly
YNL127w FAR11 0.218
Protein involved in G1 cell cycle arrest in response to pheromone, in a pathway different from the Far1p-dependent pathway; interacts with Far3p, Far7p, Far8p, Far9p, and Far10p
YBR301w DAN3 0.219
putative cell wall protein
YNR007c ATG3 0.219
Protein involved in autophagy: E2-like enzyme that plays a role in formation of Atg8p-phosphatidylethanolamine conjugates, which are involved in membrane dynamics during autophagy
YDR492w IZH1 0.219
Membrane protein involved in zinc metabolism, member of the four-protein IZH family, direct target of the Zap1p transcription factor, expression induced by zinc deficiency and fatty acids, deletion increases sensitivity to elevated zinc
YFR039c 0.219
Hypothetical ORF
YBR272c HSM3 0.219
Protein of unknown function, involved in DNA mismatch repair during slow growth; has weak similarity to Msh1p
YJL077c ICS3 0.219
Protein of unknown function
YJR080c 0.220
The authentic, non-tagged protein was localized to the mitochondria
YDR046c BAP3 0.220
Amino acid permease involved in the uptake of cysteine, leucine, isoleucine and valine
YHR131c 0.220
Hypothetical ORF
YPL001w HAT1 0.221
histone acetyltransferase
YLR422w 0.221
Hypothetical ORF
YDR443c SSN2 0.221
transcription factor
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