SCMD Saccharomyces Cerevisiae Morphological Database
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Keywords: (ex. rad52, polarisome)

Sortable ORF Parameter Sheet

Parameter Name:D109_C
Stain Type:Nucleus
Nucleus Status:C
Parameter Type:Average
Description:Distance from neck to bud's nucleus in nucleus C
Definition:Distance from neck to bud's nucleus in nucleus C
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ORF Std. Name D109_C
YOR058c ASE1 10.9
Member of a family of microtubule-associated proteins (MAPs) that function at the mitotic spindle midzone: required for spindle elongation: undergoes cell cycle-regulated degradation by anaphase promoting complex: potential Cdc28p substrate
YLL043w FPS1 11.2
glycerol channel protein
YLR185w RPL37A 11.3
ribosomal protein L37A (L43) (YL35)
YPL046c ELC1 11.3
elongin C transcription elongation factor
YNL226w 11.3
Hypothetical ORF
YKL037w 11.4
Hypothetical ORF
YDR382w RPP2B 11.4
ribosomal protein P2B (YP2beta) (L45)
YHR091c MSR1 11.4
arginyl-tRNA synthetase
YFR001w LOC1 11.5
Nuclear protein involved in asymmetric localization of ASH1 mRNA; binds double-stranded RNA in vitro
YNL197c WHI3 11.5
RNA binding protein (putative)
YNL228w 11.5
Hypothetical ORF
YMR193c-A 11.5
Hypothetical ORF
YGR255c COQ6 11.6
monooxygenase
YGL223c COG1 11.6
Component of the conserved oligomeric Golgi complex; interacts with Cog2p
YCR003w MRPL32 11.6
ribosomal protein (YmL32)
YPL042c SSN3 11.6
Component of RNA polymerase II holoenzyme, involved in RNA pol II carboxy-terminal domain phosphorylation
YJR117w STE24 11.6
Highly conserved zinc metalloprotease that functions in two steps of a-factor maturation, C-terminal CAAX proteolysis and the first step of N-terminal proteolytic processing: contains multiple transmembrane spans
YKL053c-A MDM35 11.6
Mitochondrial Distribution and Morphology
YBR132c AGP2 11.6
plasma membrane carnitine transporter
YGL205w POX1 11.6
fatty-acyl coenzyme A oxidase
YOR358w HAP5 11.7
CCAAT-binding transcription factor component (along with Hap2p and Hap3p)
YMR216c SKY1 11.7
SRPK1-like Kinase in Yeast (SRPK1 is a human serine kinase that specifically phosphoryates arginine-serine rich domains found in the SR family of splicing factors.)
YLR374c 11.7
Hypothetical ORF
YJL188c BUD19 11.7
Dubious open reading frame, unlikely to encode a protein; not conserved in closely related Saccharomyces species; 88% of ORF overlaps the verified gene RPL39; diploid mutant displays a weak budding pattern phenotype in a systematic assay
YJL189w RPL39 11.7
Protein component of the large (60S) ribosomal subunit, has similarity to rat L39 ribosomal protein: required for ribosome biogenesis: exhibits genetic interactions with SIS1 and PAB1
YIR026c YVH1 11.7
protein tyrosine phosphatase induced by nitrogen starvation
YDL075w RPL31A 11.8
Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl31Bp and has similarity to rat L31 ribosomal protein: associates with the karyopherin Sxm1p
YMR307w GAS1 11.8
Beta-1.3-glucanosyltransferase, required for cell wall assembly: localizes to the cell surface via a glycosylphosphatidylinositol (GPI) anchor
YMR242c RPL20A 11.8
Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl20Bp and has similarity to rat L18a ribosomal protein
YGR062c COX18 11.8
Mitochondrial inner membrane protein, required for export of the Cox2p C terminus from the mitochondrial matrix to the intermembrane space during its assembly into cytochrome c oxidase; similar to Oxa2p of N.crassa
YNL168c 11.9
The authentic, non-tagged protein was localized to mitochondria
YGR162w TIF4631 11.9
150 kDa subunit|Tif4632p and mammalian p220 homolog|mRNA cap binding protein eIF-4F
YCR028c FEN2 11.9
Plasma Membrane H+-Pantothenate Symporter
YLR061w RPL22A 11.9
ribosomal protein L22A (L1c) (rp4) (YL31)
YGL135w RPL1B 11.9
N-terminally acetylated protein component of the large (60S) ribosomal subunit, nearly identical to Rpl1Bp and has similarity to E. coli L1 and rat L10a ribosomal proteins: rpl1a rpl1b double null mutation is lethal
YHR120w MSH1 11.9
mutS homolog
YOR171c LCB4 11.9
sphingoid long chain base (LCB) kinase
YDR296w MHR1 11.9
Protein involved in homologous recombination in mitochondria and in transcription regulation in nucleus: binds to activation domains of acidic activators: required for recombination-dependent mtDNA partitioning
YPR005c HAL1 11.9
polar 32 kDa cytoplasmic protein
YDR109c 11.9
Hypothetical ORF
YNL227c JJJ1 12.0
Protein that may function as a cochaperone, as suggested by the presence of a DnaJ-like domain
YDL033c SLM3 12.0
Mitochondrial protein with a potential role in protein synthesis: the bacterial homolog is responsible for the 2-thiolation of mnm5s2U34 in tRNALys, tRNAGlu, and tRNAGln
YPR147c 12.0
Hypothetical ORF
YNL032w SIW14 12.0
tyrosine phosphatase
YML078w CPR3 12.0
cyclophilin|peptidyl-prolyl cis-trans isomerase (PPIase)
YKR094c RPL40B 12.0
Fusion protein, identical to Rpl40Ap, that is cleaved to yield ubiquitin and a ribosomal protein of the large (60S) ribosomal subunit with similarity to rat L40: ubiquitin may facilitate assembly of the ribosomal protein into ribosomes
YGR037c ACB1 12.0
acyl-CoA-binding protein (ACBP)/diazepam binding inhibitor (DBI)/endozepine (EP)
YGL246c RAI1 12.0
Nuclear protein that binds to and stabilizes the exoribonuclease Rat1p, required for pre-rRNA processing
YGR222w PET54 12.0
Protein required for splicing of the COX1 intron AI5 beta; also specifically required, together with Pet122p and Pet494p, for translation of the COX3 mRNA; located in the mitochondrial inner membrane
YOL041c NOP12 12.1
Nucleolar protein, required for pre-25S rRNA processing; contains an RNA recognition motif (RRM) and has similarity to Nop13p, Nsr1p, and putative orthologs in Drosophila and S. pombe
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