SCMD Saccharomyces Cerevisiae Morphological Database
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Keywords: (ex. rad52, polarisome)

Sortable ORF Parameter Sheet

Parameter Name:D15-3_C
Stain Type:Nucleus
Nucleus Status:C
Parameter Type:Average
Description:Sum of brightness in nucleus region in nucleus C
Definition:Sum of brightness in nucleus region in nucleus C
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ORF Std. Name D15-3_C
YPL172c COX10 5.44E+3
farnesyl transferase (putative)
YMR261c TPS3 5.77E+3
trehalose-6-phosphate synthase/phosphatase complex 115 kDa regulatory subunit
YCL055w KAR4 5.95E+3
involved in karyogamy|transcription factor
YCL036w GFD2 6.06E+3
Protein of unknown function, identified as a high-copy suppressor of a dbp5 mutation
YDR493w 6.13E+3
The authentic, non-tagged protein was localized to the mitochondria
YHR096c HXT5 6.33E+3
hexose transporter
YBR182c SMP1 6.35E+3
Transcription factor of the MADS (Mcm1p, Agamous, Deficiens, SRF) box family; closely related to RLM1
YCL042w 6.37E+3
Hypothetical ORF
YDR533c HSP31 6.50E+3
Possible chaperone and cysteine protease with similarity to E. coli Hsp31 and S. cerevisiae Hsp32p, Hsp33p, and Sno4p; member of the DJ-1/ThiJ/PfpI superfamily, which includes human DJ-1 involved in Parkinson's disease; exists as a dimer
YER164w CHD1 6.60E+3
transcriptional regulator
YCL039w GID7 6.65E+3
Protein of unknown function, involved in proteasome-dependent catabolite inactivation of fructose-1,6-bisphosphatase: contains six WD40 repeats: computational analysis suggests that Gid7p and Moh1p have similar functions
YPR097w 6.66E+3
Hypothetical ORF
YKL216w URA1 6.74E+3
dihydroorotate dehydrogenase
YPL163c SVS1 6.74E+3
Cell wall and vacuolar protein, required for wild-type resistance to vanadate
YBR240c THI2 6.83E+3
Zinc finger protein of the Zn(II)2Cys6 type, probable transcriptional activator of thiamine biosynthetic genes
YMR216c SKY1 6.87E+3
SRPK1-like Kinase in Yeast (SRPK1 is a human serine kinase that specifically phosphoryates arginine-serine rich domains found in the SR family of splicing factors.)
YBR034c HMT1 6.90E+3
Nuclear SAM-dependent mono- and asymmetric arginine dimethylating methyltransferase that modifies hnRNPs, including Npl3p and Hrp1p, thus facilitating nuclear export of these proteins: required for viability of npl3 mutants
YDR534c FIT1 6.99E+3
Cell wall protein involved in iron uptake
YPL113c 7.00E+3
Putative dehydrogenase
YDR530c APA2 7.00E+3
5',5'''-P-1,P-4-tetraphosphate phosphorylase II
YLR309c IMH1 7.02E+3
Protein involved in vesicular transport, mediates transport between an endosomal compartment and the Golgi, contains a Golgi-localization (GRIP) domain that interacts with activated Arl1p-GTP to localize Imh1p to the Golgi
YGR134w CAF130 7.05E+3
CCR4 Associated Factor 130 kDa
YER086w ILV1 7.07E+3
threonine deaminase
YNL274c 7.10E+3
Putative hydroxyisocaproate dehydrogenase
YBR179c FZO1 7.11E+3
Drosophila melanogaster fuzzy onions gene homolog|integral protein of the mitochondrial outer membrane; can be isolated as part of a high molecular weight complex
YMR193c-A 7.15E+3
Hypothetical ORF
YGL253w HXK2 7.17E+3
hexokinase II (PII) (also called hexokinase B)
YBR238c 7.17E+3
Hypothetical ORF
YJR129c 7.17E+3
Putative S-adenosylmethionine-dependent methyltransferase of the seven beta-strand family
YBR208c DUR1,2 7.18E+3
Urea amidolyase, contains both urea carboxylase and allophanate hydrolase activities, degrades urea to CO2 and NH3: expression sensitive to nitrogen catabolite repression and induced by allophanate, an intermediate in allantoin degradation
YHR006w STP2 7.18E+3
Transcription factor, activated by proteolytic processing in response to signals from the SPS sensor system for external amino acids; activates transcription of amino acid permease genes
YML034w SRC1 7.20E+3
Protein with a putative role in sister chromatid segregation, potentially phosphorylated by Cdc28p; green fluorescent protein (GFP)-fusion protein localizes to the nuclear periphery
YOL053c-A 7.21E+3
This ORF is a part of YOL052C-A
YJR092w BUD4 7.22E+3
Protein involved in bud-site selection and required for axial budding pattern; localizes with septins to bud neck in mitosis and may constitute "axial landmark" for next round of budding; potential Cdc28p substrate
YCL047c 7.35E+3
Hypothetical ORF
YCL057w PRD1 7.35E+3
Zinc metalloendopeptidase, found in the cytoplasm and intermembrane space of mitochondria
YLR405w DUS4 7.36E+3
dihydrouridine synthase 4
YDR479c PEX29 7.36E+3
peroxin
YBR239c 7.38E+3
Hypothetical ORF
YGL215w CLG1 7.42E+3
cyclin-like protein that interacts with Pho85p in affinity chromatography
YHR116w COX23 7.48E+3
Protein that functions in mitochondrial copper homeostasis and is essential for functional cytochrome oxidase expression; homologous to COX17, localized to the mitochondrial intermembrane space
YIR018w YAP5 7.53E+3
bZIP (basic-leucine zipper) protein|transcription factor
YLR090w XDJ1 7.53E+3
Homolog of E. coli DnaJ, closely related to Ydj1p
YPR029c APL4 7.59E+3
clathrin associated protein complex large subunit|gamma-adaptin
YCL040w GLK1 7.59E+3
Glucokinase, catalyzes the phosphorylation of glucose at C6 in the first irreversible step of glucose metabolism: one of three glucose phosphorylating enzymes: expression regulated by non-fermentable carbon sources
YOL053w 7.62E+3
Hypothetical ORF
YKL062w MSN4 7.63E+3
zinc finger protein
YBR183w YPC1 7.65E+3
alkaline ceramidase with reverse activity
YKL137w 7.65E+3
Hypothetical ORF
YLR062c BUD28 7.66E+3
Dubious open reading frame, unlikely to encode a protein; not conserved in closely related Saccharomyces species; 98% of ORF overlaps the verified gene RPL22A; diploid mutant displays a weak budding pattern phenotype in a systematic assay
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