SCMD Saccharomyces Cerevisiae Morphological Database
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Keywords: (ex. rad52, polarisome)

Sortable ORF Parameter Sheet

Parameter Name:D129_A1B
Stain Type:Nucleus
Nucleus Status:A1B
Parameter Type:Average
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ORF Std. Name D129_A1B
YIL034c CAP2 18.0
capping protein beta subunit
YNL079c TPM1 18.2
Tropomyosin isoform 1, major isoform of tropomyosin: actin-binding protein that stabilizes actin filaments: required for the formation and stability of actin cables in vivo which direct polarized cell growth and the distribution of several organelles
YNL197c WHI3 18.3
RNA binding protein (putative)
YIL052c RPL34B 18.4
ribosomal protein L34B
YDL232w OST4 18.6
3.6 kDa protein
YDR417c 18.8
Hypothetical ORF
YOL004w SIN3 18.9
DNA binding protein involved in transcriptional regulation
YKL007w CAP1 19.2
capping protein
YJL188c BUD19 19.4
Dubious open reading frame, unlikely to encode a protein; not conserved in closely related Saccharomyces species; 88% of ORF overlaps the verified gene RPL39; diploid mutant displays a weak budding pattern phenotype in a systematic assay
YPL042c SSN3 19.4
Component of RNA polymerase II holoenzyme, involved in RNA pol II carboxy-terminal domain phosphorylation
YDL198c GGC1 19.5
Mitochondrial GTP/GDP transporter, essential for mitochondrial genome maintenance: has a role in mitochondrial iron transport: member of the mitochondrial carrier family: (putative) mitochondrial carrier protein
YGL212w VAM7 19.5
Regulator of vacuolar morphogenesis: hydrophilic protein, heptad repeat motif
YDR080w VPS41 19.5
vacuolar protein sorting: component of vacuolar membrane protein complex
YDR382w RPP2B 19.5
ribosomal protein P2B (YP2beta) (L45)
YLR090w XDJ1 19.5
Homolog of E. coli DnaJ, closely related to Ydj1p
YDL033c SLM3 19.7
Mitochondrial protein with a potential role in protein synthesis: the bacterial homolog is responsible for the 2-thiolation of mnm5s2U34 in tRNALys, tRNAGlu, and tRNAGln
YMR307w GAS1 19.7
Beta-1.3-glucanosyltransferase, required for cell wall assembly: localizes to the cell surface via a glycosylphosphatidylinositol (GPI) anchor
YOR106w VAM3 19.7
Syntaxin-related protein: required for vacuolar assembly: PEP12 homolog: member of the syntaxin family of proteins: predicted C-terminal TMD
YGR151c 19.7
Hypothetical ORF
YLR184w 19.7
Hypothetical ORF
YBR131w CCZ1 19.8
Calcium Caffeine Zinc sensitivity
YKL212w SAC1 19.8
phosphoinositide phosphatase
YIL084c SDS3 19.8
Functions are similar to those of SIN3 and RPD3
YMR194w RPL36A 19.8
N-terminally acetylated protein component of the large (60S) ribosomal subunit, nearly identical to Rpl36Ap and has similarity to rat L36 ribosomal protein: binds to 5.8 S rRNA
YNL271c BNI1 19.8
Formin, nucleates the formation of linear actin filaments, involved in cell processes such as budding and mitotic spindle orientation which require the formation of polarized actin cables, functionally redundant with BNR1
YHL011c PRS3 19.9
ribose-phosphate pyrophosphokinase
YDL006w PTC1 19.9
Type 2C protein phosphatase (PP2C): inactivates the osmosensing MAPK cascade by dephosphorylating Hog1p: mutation delays mitochondrial inheritance: deletion reveals defects in precursor tRNA splicing, sporulation and cell separation
YLR382c NAM2 19.9
Mitochondrial leucyl-tRNA synthetase, also has a direct role in splicing of several mitochondrial group I introns: indirectly required for mitochondrial genome maintenance
YKL053c-A MDM35 19.9
Mitochondrial Distribution and Morphology
YBR084c-A RPL19A 19.9
ribosomal protein L19A (L23A) (rpl5L) (YL14)
YMR256c COX7 19.9
cytochrome c oxidase subunit VII
YMR242c RPL20A 19.9
Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl20Bp and has similarity to rat L18a ribosomal protein
YLR421c RPN13 19.9
Subunit of the 19S regulatory particle of the 26S proteasome lid
YJL157c FAR1 19.9
Cdc28p kinase inhibitor
YOR231w MKK1 20.0
Mitogen-activated kinase kinase involved in protein kinase C signaling pathway that controls cell integrity: upon activation by Bck1p phosphorylates downstream target, Slt2p: functionally redundant with Mkk2p
YFR001w LOC1 20.0
Nuclear protein involved in asymmetric localization of ASH1 mRNA; binds double-stranded RNA in vitro
YLR372w SUR4 20.0
Elongase III synthesizes 20-26-carbon fatty acids from C18-CoA primers: involved in fatty acid biosynthesis
YGL025c PGD1 20.0
Probable transcription factor, polyglutamine domain protein
YLR074c BUD20 20.0
Protein involved in bud-site selection; diploid mutants display a random budding pattern instead of the wild-type bipolar pattern
YKR055w RHO4 20.0
GTP-binding protein|ras homolog
YGR159c NSR1 20.0
Nucleolar protein that binds nuclear localization sequences, required for pre-rRNA processing and ribosome biogenesis
YGL223c COG1 20.0
Component of the conserved oligomeric Golgi complex; interacts with Cog2p
YNL226w 20.1
Hypothetical ORF
YBR191w RPL21A 20.1
Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl21Bp and has similarity to rat L21 ribosomal protein
YOR061w CKA2 20.1
protein kinase CK2 alpha' subunit
YJL051w 20.1
Protein of unknown function, localized to the bud tip; mRNA is targeted to the bud via the mRNA transport system involving She2p
YHR162w 20.1
Hypothetical ORF
YLR192c HCR1 20.1
Substoichiometric component of eukaryotic translation initiation factor 3 (eIF3)
YOR327c SNC2 20.1
vesicle-associated membrane protein (synaptobrevin) homolog
YBR093c PHO5 20.1
acid phosphatase
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