SCMD Saccharomyces Cerevisiae Morphological Database
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Keywords: (ex. rad52, polarisome)

Sortable ORF Parameter Sheet

Parameter Name:D114_A1B
Stain Type:Nucleus
Nucleus Status:A1B
Parameter Type:Average
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ORF Std. Name D114_A1B
YJL127c SPT10 0.254
transcriptional regulator
YJL080c SCP160 0.256
May be required during cell division for faithful partitioning of the ER-nuclear envelope membranes, involved in control of mitotic chromsome transmission
YCR002c CDC10 0.261
YIL040w 0.262
Protein of unknown function, localizes to the endoplasmic reticulum
YPR135w CTF4 0.265
DNA polymerase alpha binding protein
YLR233c EST1 0.268
Telomere elongation protein
YPR163c TIF3 0.268
translation initiation factor eIF-4B
YDR264c AKR1 0.278
ankyrin repeat-containing protein
YOR080w DIA2 0.281
Protein of unknown function, involved in invasive and pseudohyphal growth
YGL163c RAD54 0.283
DNA-dependent ATPase, stimulates strand exchange by modifying the topology of double-stranded DNA; involved in the recombinational repair of double-strand breaks in DNA during vegetative growth and meiosis; member of the SWI/SNF family
YBR279w PAF1 0.284
RNA polymerase II-associated protein, defines a large complex that is biochemically and functionally distinct from the Srb-Mediator form of Pol II holoenzyme and is required for full expression of a subset of cell cycle-regulated genes
YDR369c XRS2 0.285
DNA repair protein
YLL002w RTT109 0.285
Regulator of Ty1 Transposition; Regulation of mitochondrial network; Killed in Mutagen, sensitive to diepoxybutane and/or mitomycin C
YDR173c ARG82 0.286
Protein involved in regulation of arginine-responsive and Mcm1p-dependent genes: has a dual-specificity inositol polyphosphate kinase activity required for regulation of phosphate- and nitrogen-responsive genes
YKL048c ELM1 0.290
Serine/threonine protein kinase that regulates cellular morphogenesis, septin behavior, and cytokinesis: required for the regulation of other kinases: forms part of the bud neck ring
YHR031c RRM3 0.290
DNA helicase
YGR104c SRB5 0.291
RNA polymerase II holoenzyme/mediator subunit
YER070w RNR1 0.292
Ribonucleotide-diphosphate reductase (RNR), large subunit: the RNR complex catalyzes the rate-limiting step in dNTP synthesis and is regulated by DNA replication and DNA damage checkpoint pathways via localization of the small subunits
YCR066w RAD18 0.293
ATPase (putative)|zinc finger protein
YCR023c 0.293
Hypothetical ORF
YMR014w BUD22 0.294
Protein involved in bud-site selection; diploid mutants display a random budding pattern instead of the wild-type bipolar pattern
YDL115c IWR1 0.294
Interacts with RNA Polymerase II
YML032c RAD52 0.295
Protein that stimulates strand exchange by facilitating Rad51p binding to single-stranded DNA; anneals complementary single-stranded DNA; involved in the repair of double-strand breaks in DNA during vegetative growth and meiosis
YJL115w ASF1 0.295
anti-silencing protein that causes depression of silent loci when overexpressed
YLR318w EST2 0.295
Reverse transcriptase subunit of the telomerase holoenzyme, essential for telomerase core catalytic activity, involved in other aspects of telomerase assembly and function
YOR369c RPS12 0.296
ribosomal protein S12
YPR120c CLB5 0.298
B-type cyclin
YPL097w MSY1 0.299
tyrosine-tRNA ligase
YGL070c RPB9 0.300
RNA polymerase II subunit B12.6: contacts DNA: mutations affect transcription start site
YOL148c SPT20 0.301
histone acetyltransferase SAGA complex member|transcription factor
YKL113c RAD27 0.301
42 kDa 5' to 3' exonuclease required for Okazaki fragment processing
YDL116w NUP84 0.301
nuclear pore complex subunit|similar to mammalian Nup107p
YMR104c YPK2 0.301
Protein kinase with similarityto serine/threonine protein kinase Ypk1p: functionally redundant with YPK1 at the genetic level: participates in a signaling pathway required for optimal cell wall integrity: homolog of mammalian kinase SGK
YGL058w RAD6 0.301
ubiquitin-conjugating enzyme
YML028w TSA1 0.303
Thioredoxin-peroxidase (TPx), reduces H2O2 and alkyl hydroperoxides with the use of hydrogens provided by thioredoxin, thioredoxin reductase, and NADPH: provides protection against oxidation systems that generate reactive oxygen and sulfur species
YGR180c RNR4 0.305
Ribonucleotide-diphosphate reductase (RNR), small subunit: the RNR complex catalyzes the rate-limiting step in dNTP synthesis and is regulated by DNA replication and DNA damage checkpoint pathways via localization of the small subunits
YNL171c 0.305
Hypothetical ORF
YMR224c MRE11 0.305
Subunit of a complex with Rad50p and Xrs2p (RMX complex) that functions in repair of DNA double-strand breaks and in telomere stability, exhibits nuclease activity that appears to be required for RMX function: widely conserved
YBR112c CYC8 0.305
General transcriptional co-repressor, acts together with Tup1p: also acts as part of a transcriptional co-activator complex that recruits the SWI/SNF and SAGA complexes to promoters
YCL016c DCC1 0.306
Defective in sister Chromatid Cohesion
YMR078c CTF18 0.306
Subunit of a complex with Ctf8p that shares some subunits with Replication Factor C and is required for sister chromatid cohesion; may have overlapping functions with Rad24p in the DNA damage replication checkpoint
YKL053w 0.306
Hypothetical ORF
YML014w TRM9 0.307
mcm5U/mcm5s2U tRNA carboxyl methyltransferase
YIL009w FAA3 0.307
acyl-CoA synthase
YMR116c ASC1 0.307
WD repeat protein (G-beta like protein) involved in translation regulation: required for repression of Gcn4p activity in the absence of amino-acid starvation: core component of the ribosome: ortholog of mammalian RACK1
YNL298w CLA4 0.307
Ste20p homolog|protein kinase
YKL101w HSL1 0.308
serine-threonine kinase
YDR507c GIN4 0.308
Protein kinase involved in bud growth and assembly of the septin ring, proposed to have kinase-dependent and kinase-independent activities: undergoes autophosphorylation: similar to Kcc4p and Hsl1p
YNL246w VPS75 0.308
YOR258w HNT3 0.308
Member of the third branch of the histidine triad (HIT) superfamily of nucleotide-binding proteins; similar to Aprataxin, a Hint related protein that is mutated in individuals with ataxia with oculomotor apraxia
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