SCMD Saccharomyces Cerevisiae Morphological Database
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Keywords: (ex. rad52, polarisome)

Sortable ORF Parameter Sheet

Parameter Name:D110_A1B
Stain Type:Nucleus
Nucleus Status:A1B
Parameter Type:Average
Description:Distance from neck to nucleus center in nucleus A1B
Definition:Distance from neck to nucleus center in nucleus A1B
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ORF Std. Name D110_A1B
YMR104c YPK2 9.75
Protein kinase with similarityto serine/threonine protein kinase Ypk1p: functionally redundant with YPK1 at the genetic level: participates in a signaling pathway required for optimal cell wall integrity: homolog of mammalian kinase SGK
YGL163c RAD54 9.82
DNA-dependent ATPase, stimulates strand exchange by modifying the topology of double-stranded DNA; involved in the recombinational repair of double-strand breaks in DNA during vegetative growth and meiosis; member of the SWI/SNF family
YLR318w EST2 9.87
Reverse transcriptase subunit of the telomerase holoenzyme, essential for telomerase core catalytic activity, involved in other aspects of telomerase assembly and function
YDR369c XRS2 9.91
DNA repair protein
YOR187w TUF1 10.0
translation elongation factor Tu, mitochondrial
YOL035c 10.0
Hypothetical ORF
YIL093c RSM25 10.0
mitochondrial ribosome small subunit component
YCR023c 10.1
Hypothetical ORF
YPL097w MSY1 10.2
tyrosine-tRNA ligase
YNL197c WHI3 10.2
RNA binding protein (putative)
YKL142w MRP8 10.2
ribosomal protein
YHL021c 10.3
The authentic, non-tagged protein was localized to the mitochondria
YGL016w KAP122 10.3
Karyopherin beta, responsible for import of the Toa1p-Toa2p complex into the nucleus: binds to nucleoporins Nup1p and Nup2p: may play a role in regulation of pleiotropic drug resistance
YLR353w BUD8 10.3
Protein involved in bud-site selection; diploid mutants display a unipolar budding pattern instead of the wild-type bipolar pattern, and bud at the proximal pole
YML028w TSA1 10.3
Thioredoxin-peroxidase (TPx), reduces H2O2 and alkyl hydroperoxides with the use of hydrogens provided by thioredoxin, thioredoxin reductase, and NADPH: provides protection against oxidation systems that generate reactive oxygen and sulfur species
YDR076w RAD55 10.4
RecA homolog|interacts with Rad51p and Rad57p by two-hybrid analysis|similar to DMC1, RAD51, RAD57
YLR393w ATP10 10.4
Mitochondrial inner membrane protein required for assembly of the F0 sector of mitochondrial F1F0 ATP synthase, interacts genetically with ATP6
YJR011c 10.4
Hypothetical ORF
YNL154c YCK2 10.4
casein kinase I homolog
YMR316w DIA1 10.4
Protein of unknown function, involved in invasive and pseudohyphal growth; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm in a punctate pattern
YDL006w PTC1 10.4
Type 2C protein phosphatase (PP2C): inactivates the osmosensing MAPK cascade by dephosphorylating Hog1p: mutation delays mitochondrial inheritance: deletion reveals defects in precursor tRNA splicing, sporulation and cell separation
YFL063w 10.4
Hypothetical ORF
YLR233c EST1 10.5
Telomere elongation protein
YGR040w KSS1 10.5
MAP kinase|involved in pheromone signal transduction
YLL002w RTT109 10.5
Regulator of Ty1 Transposition; Regulation of mitochondrial network; Killed in Mutagen, sensitive to diepoxybutane and/or mitomycin C
YCL062w 10.5
YLR232w 10.5
Hypothetical ORF
YAL039c CYC3 10.5
cytochrome c heme lyase (CCHL)
YGR063c SPT4 10.5
transcriptional regulator|zinc finger protein
YDR004w RAD57 10.5
RecA homolog|interacts with Rad 55p by two-hybrid analysis|similar to DMC1, RAD51, and RAD55
YIL014w MNT3 10.5
alpha-1,3-mannosyltransferase
YPR120c CLB5 10.5
B-type cyclin
YNL025c SSN8 10.5
Component of RNA polymerase II holoenzyme, involved in RNA pol II carboxy-terminal domain phosphorylation
YDR507c GIN4 10.5
Protein kinase involved in bud growth and assembly of the septin ring, proposed to have kinase-dependent and kinase-independent activities: undergoes autophosphorylation: similar to Kcc4p and Hsl1p
YMR224c MRE11 10.5
Subunit of a complex with Rad50p and Xrs2p (RMX complex) that functions in repair of DNA double-strand breaks and in telomere stability, exhibits nuclease activity that appears to be required for RMX function: widely conserved
YEL013w VAC8 10.5
Phosphorylated vacuolar membrane protein that interacts with Atg13p, required for the cytoplasm-to-vacuole targeting (Cvt) pathway: interacts with Nvj1p to form nucleus-vacuole junctions
YGL151w NUT1 10.5
Component of the RNA polymerase II mediator complex, which is required for transcriptional activation and also has a role in basal transcription
YNL303w 10.5
Hypothetical ORF
YNR001c CIT1 10.5
Citrate synthase, catalyzes the condensation of acetyl coenzyme A and oxaloacetate to form citrate: the rate-limiting enzyme of the TCA cycle: nuclear encoded mitochondrial protein
YDL059c RAD59 10.5
the RAD59 gene product has homology to the Rad52 protein
YDL036c 10.5
Hypothetical ORF
YDR423c CAD1 10.5
basic leucine zipper transcription factor
YOR186w 10.5
Hypothetical ORF
YPL038w MET31 10.5
highly homologous to Met32p|transcriptional regulator of sulfur amino acid metabolism|zinc finger protein
YNR061c 10.5
Hypothetical ORF
YHR140w 10.6
Hypothetical ORF
YPL024w NCE4 10.6
involved in cell separation
YKR028w SAP190 10.6
type 2A-related protein phosphatase
YCR066w RAD18 10.6
ATPase (putative)|zinc finger protein
YER095w RAD51 10.6
Rad51p colocalizes to ~ 65 spots with Dmc1p prior to synapsis (independently of ZIP1 and DMC1), and interacts with Rad52p and Rad55p; human Rad51p homolog interacts with Brca2 protein which has been implicated in causing breast cancer|RecA homolog
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