SCMD Saccharomyces Cerevisiae Morphological Database
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Keywords: (ex. rad52, polarisome)

Sortable ORF Parameter Sheet

Parameter Name:D107_A1B
Stain Type:Nucleus
Nucleus Status:A1B
Parameter Type:Average
Description:Ratio of D104 to C103 in nucleus A1B
Definition:Ratio of D104 to C103 in nucleus A1B
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ORF Std. Name D107_A1B
YKL007w CAP1 0.532
capping protein
YAL047c SPC72 0.536
Spc72p interacts with Stu2p in the two-hybrid assay; Spc72p localizes to the spindle pole bodies. Molecular weight is 72 kD
YDR523c SPS1 0.544
dispensable for mitosis, involved in middle/late stage of meiosis, required for spore wall formation
YNL079c TPM1 0.546
Tropomyosin isoform 1, major isoform of tropomyosin: actin-binding protein that stabilizes actin filaments: required for the formation and stability of actin cables in vivo which direct polarized cell growth and the distribution of several organelles
YPL269w KAR9 0.549
Karyogamy protein required for correct positioning of the mitotic spindle and for orienting cytoplasmic microtubules, localizes at the shmoo tip in mating cells and at the tip of the growing bud in small-budded cells through anaphase
YAR014c BUD14 0.549
Protein involved in bud-site selection; diploid mutants display a random budding pattern instead of the wild-type bipolar pattern
YGR036c CAX4 0.550
contains 3 short stretches of amino acids that are characteristic for a wide variety of phosphatases, including lipid phosphatases and a protein phosphatase
YDL232w OST4 0.554
3.6 kDa protein
YMR231w PEP5 0.555
Zn-finger protein (putative)
YDR028c REG1 0.556
Glc7p regulatory subunit
YDR080w VPS41 0.558
vacuolar protein sorting: component of vacuolar membrane protein complex
YBR191w RPL21A 0.560
Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl21Bp and has similarity to rat L21 ribosomal protein
YBL025w RRN10 0.562
upstream activation factor subunit
YOR327c SNC2 0.563
vesicle-associated membrane protein (synaptobrevin) homolog
YOR106w VAM3 0.563
Syntaxin-related protein: required for vacuolar assembly: PEP12 homolog: member of the syntaxin family of proteins: predicted C-terminal TMD
YBR204c 0.566
Hypothetical ORF
YMR267w PPA2 0.566
inorganic pyrophosphatase
YDL192w ARF1 0.567
ADP-ribosylation factor
YJR139c HOM6 0.568
L-homoserine:NADP oxidoreductase|homoserine dehydrogenase
YGL038c OCH1 0.568
Mannosyltransferase of the cis-Golgi apparatus, initiates the polymannose outer chain elongation of N-linked oligosaccharides of glycoproteins
YCR034w FEN1 0.569
Fatty acid elongase, involved in sphingolipid biosynthesis; acts on fatty acids of up to 24 carbons in length; mutations have regulatory effects on 1,3-beta-glucan synthase, vacuolar ATPase, and the secretory pathway
YOL076w MDM20 0.569
Subunit of the NatB N-terminal acetyltransferase, which catalyzes acetylation of the amino-terminal methionine residues of all proteins beginning with Met-Asp or Met-Glu and of some proteins beginning with Met-Asn or Met-Met
YBR131w CCZ1 0.569
Calcium Caffeine Zinc sensitivity
YHL011c PRS3 0.569
ribose-phosphate pyrophosphokinase
YMR307w GAS1 0.569
Beta-1.3-glucanosyltransferase, required for cell wall assembly: localizes to the cell surface via a glycosylphosphatidylinositol (GPI) anchor
YDL198c GGC1 0.570
Mitochondrial GTP/GDP transporter, essential for mitochondrial genome maintenance: has a role in mitochondrial iron transport: member of the mitochondrial carrier family: (putative) mitochondrial carrier protein
YIL034c CAP2 0.570
capping protein beta subunit
YJL124c LSM1 0.570
Component of small nuclear ribonucleoprotein complexes involved in mRNA decapping and decay
YDR320c SWA2 0.571
auxilin-like protein
YGR159c NSR1 0.571
Nucleolar protein that binds nuclear localization sequences, required for pre-rRNA processing and ribosome biogenesis
YLR320w MMS22 0.572
Protein involved in resistance to ionizing radiation: acts with Mms1p in a repair pathway that may be involved in resolving replication intermediates or preventing the damage caused by blocked replication forks
YGR151c 0.572
Hypothetical ORF
YPR068c HOS1 0.572
Putative class I histone deacetylase (HDAC) with sequence similarity to Hda1p, Rpd3p, Hos2p, and Hos3p; deletion results in increased histone acetylation at rDNA repeats; interacts with the Tup1p-Ssn6p corepressor complex
YER155c BEM2 0.573
Rho GTPase activating protein (RhoGAP) involved in the control of cytoskeleton organization and cellular morphogenesis: required for bud emergence
YBL094c 0.574
Hypothetical ORF
YGL223c COG1 0.574
Component of the conserved oligomeric Golgi complex; interacts with Cog2p
YKR055w RHO4 0.574
GTP-binding protein|ras homolog
YAR018c KIN3 0.575
Nonessential protein kinase with unknown cellular role
YBR097w VPS15 0.575
Myristoylated Serine/threonine protein kinase involved in vacuolar protein sorting
YLR148w PEP3 0.575
vacuolar membrane protein
YPR159w KRE6 0.576
Protein required for beta-1,6 glucan biosynthesis: putative beta-glucan synthase: appears functionally redundant with Skn1p
YAL007c ERP2 0.576
p24 protein involved in membrane trafficking
YPR053c 0.576
Hypothetical ORF
YKL159c RCN1 0.576
calcineurin inhibitor
YPL144w 0.577
Hypothetical ORF
YKL136w 0.577
Hypothetical ORF
YNL248c RPA49 0.578
RNA polymerase I subunit A49
YPR174c 0.578
Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the nuclear periphery; potential Cdc28p substrate
YLR192c HCR1 0.579
Substoichiometric component of eukaryotic translation initiation factor 3 (eIF3)
YDL075w RPL31A 0.580
Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl31Bp and has similarity to rat L31 ribosomal protein: associates with the karyopherin Sxm1p
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