SCMD Saccharomyces Cerevisiae Morphological Database
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Keywords: (ex. rad52, polarisome)

Sortable ORF Parameter Sheet

Parameter Name:D104_A1B
Stain Type:Nucleus
Nucleus Status:A1B
Parameter Type:Average
Description:Distance from nuclear center to mothre tip in nucleus A1B
Definition:Distance from nuclear center to mothre tip in nucleus A1B
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ORF Std. Name D104_A1B
YIL034c CAP2 17.8
capping protein beta subunit
YNL079c TPM1 17.9
Tropomyosin isoform 1, major isoform of tropomyosin: actin-binding protein that stabilizes actin filaments: required for the formation and stability of actin cables in vivo which direct polarized cell growth and the distribution of several organelles
YIL052c RPL34B 18.1
ribosomal protein L34B
YNL197c WHI3 18.4
RNA binding protein (putative)
YHL011c PRS3 18.5
ribose-phosphate pyrophosphokinase
YDR417c 18.5
Hypothetical ORF
YKL007w CAP1 18.6
capping protein
YDL232w OST4 18.7
3.6 kDa protein
YOL004w SIN3 18.9
DNA binding protein involved in transcriptional regulation
YMR231w PEP5 19.1
Zn-finger protein (putative)
YLR320w MMS22 19.1
Protein involved in resistance to ionizing radiation: acts with Mms1p in a repair pathway that may be involved in resolving replication intermediates or preventing the damage caused by blocked replication forks
YPL042c SSN3 19.3
Component of RNA polymerase II holoenzyme, involved in RNA pol II carboxy-terminal domain phosphorylation
YKL212w SAC1 19.3
phosphoinositide phosphatase
YDL118w 19.3
Hypothetical ORF
YMR267w PPA2 19.4
inorganic pyrophosphatase
YDL033c SLM3 19.4
Mitochondrial protein with a potential role in protein synthesis: the bacterial homolog is responsible for the 2-thiolation of mnm5s2U34 in tRNALys, tRNAGlu, and tRNAGln
YDR080w VPS41 19.4
vacuolar protein sorting: component of vacuolar membrane protein complex
YJL188c BUD19 19.4
Dubious open reading frame, unlikely to encode a protein; not conserved in closely related Saccharomyces species; 88% of ORF overlaps the verified gene RPL39; diploid mutant displays a weak budding pattern phenotype in a systematic assay
YOR106w VAM3 19.4
Syntaxin-related protein: required for vacuolar assembly: PEP12 homolog: member of the syntaxin family of proteins: predicted C-terminal TMD
YJR139c HOM6 19.4
L-homoserine:NADP oxidoreductase|homoserine dehydrogenase
YLR090w XDJ1 19.4
Homolog of E. coli DnaJ, closely related to Ydj1p
YAL009w SPO7 19.5
Integral nuclear/ER membrane protein of unknown function, required for normal nuclear envelope morphology and sporulation
YOR085w OST3 19.5
oligosaccharyl transferase glycoprotein complex 34 kDa gamma subunit
YDR382w RPP2B 19.6
ribosomal protein P2B (YP2beta) (L45)
YLR184w 19.6
Hypothetical ORF
YGR151c 19.6
Hypothetical ORF
YOL018c TLG2 19.6
tSNARE that affects a late Golgi compartment
YGR152c RSR1 19.6
Gtp-binding protein of the ras superfamily involved in bud site selection
YOR083w WHI5 19.6
function unknown
YJL157c FAR1 19.6
Cdc28p kinase inhibitor
YDL006w PTC1 19.6
Type 2C protein phosphatase (PP2C): inactivates the osmosensing MAPK cascade by dephosphorylating Hog1p: mutation delays mitochondrial inheritance: deletion reveals defects in precursor tRNA splicing, sporulation and cell separation
YDR418w RPL12B 19.7
ribosomal protein L12B (L15B) (YL23)
YDL198c GGC1 19.7
Mitochondrial GTP/GDP transporter, essential for mitochondrial genome maintenance: has a role in mitochondrial iron transport: member of the mitochondrial carrier family: (putative) mitochondrial carrier protein
YMR242c RPL20A 19.7
Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl20Bp and has similarity to rat L18a ribosomal protein
YMR307w GAS1 19.7
Beta-1.3-glucanosyltransferase, required for cell wall assembly: localizes to the cell surface via a glycosylphosphatidylinositol (GPI) anchor
YKL053c-A MDM35 19.7
Mitochondrial Distribution and Morphology
YGR159c NSR1 19.7
Nucleolar protein that binds nuclear localization sequences, required for pre-rRNA processing and ribosome biogenesis
YNL271c BNI1 19.7
Formin, nucleates the formation of linear actin filaments, involved in cell processes such as budding and mitotic spindle orientation which require the formation of polarized actin cables, functionally redundant with BNR1
YDL062w 19.7
Hypothetical ORF
YFR001w LOC1 19.7
Nuclear protein involved in asymmetric localization of ASH1 mRNA; binds double-stranded RNA in vitro
YLR372w SUR4 19.8
Elongase III synthesizes 20-26-carbon fatty acids from C18-CoA primers: involved in fatty acid biosynthesis
YNL225c CNM67 19.8
chaotic nuclear migration; predicted mass is 67kDa
YLR382c NAM2 19.8
Mitochondrial leucyl-tRNA synthetase, also has a direct role in splicing of several mitochondrial group I introns: indirectly required for mitochondrial genome maintenance
YBR191w RPL21A 19.8
Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl21Bp and has similarity to rat L21 ribosomal protein
YGR036c CAX4 19.8
contains 3 short stretches of amino acids that are characteristic for a wide variety of phosphatases, including lipid phosphatases and a protein phosphatase
YKR055w RHO4 19.8
GTP-binding protein|ras homolog
YMR256c COX7 19.8
cytochrome c oxidase subunit VII
YBR093c PHO5 19.8
acid phosphatase
YGL212w VAM7 19.9
Regulator of vacuolar morphogenesis: hydrophilic protein, heptad repeat motif
YAL026c DRS2 19.9
Integral membrane Ca(2+)-ATPase, potential aminophospholipid translocase required to form a specific class of secretory vesicles that accumulate upon actin cytoskeleton disruption: mutation affects maturation of the 18S rRNA
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