SCMD Saccharomyces Cerevisiae Morphological Database
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Keywords: (ex. rad52, polarisome)

Sortable ORF Parameter Sheet

Parameter Name:D15-3_A1B
Stain Type:Nucleus
Nucleus Status:A1B
Parameter Type:Average
Description:Sum of brightness in nucleus region in nucleus A1B
Definition:Sum of brightness in nucleus region in nucleus A1B
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ORF Std. Name D15-3_A1B
YDR493w 4.12E+3
The authentic, non-tagged protein was localized to the mitochondria
YCL057w PRD1 4.43E+3
Zinc metalloendopeptidase, found in the cytoplasm and intermembrane space of mitochondria
YHR096c HXT5 4.44E+3
hexose transporter
YCL036w GFD2 4.55E+3
Protein of unknown function, identified as a high-copy suppressor of a dbp5 mutation
YBR034c HMT1 4.58E+3
Nuclear SAM-dependent mono- and asymmetric arginine dimethylating methyltransferase that modifies hnRNPs, including Npl3p and Hrp1p, thus facilitating nuclear export of these proteins: required for viability of npl3 mutants
YPL113c 4.62E+3
Putative dehydrogenase
YCL055w KAR4 4.65E+3
involved in karyogamy|transcription factor
YPR097w 4.71E+3
Hypothetical ORF
YBR182c SMP1 4.75E+3
Transcription factor of the MADS (Mcm1p, Agamous, Deficiens, SRF) box family; closely related to RLM1
YMR261c TPS3 4.76E+3
trehalose-6-phosphate synthase/phosphatase complex 115 kDa regulatory subunit
YJR092w BUD4 4.81E+3
Protein involved in bud-site selection and required for axial budding pattern; localizes with septins to bud neck in mitosis and may constitute "axial landmark" for next round of budding; potential Cdc28p substrate
YCL042w 4.82E+3
Hypothetical ORF
YHR064c SSZ1 4.92E+3
DnaK homolog, interacts with Zuo1p (DnaJ homolog) to form a ribosome-associated complex (RAC) that is bound to the ribosome via the Zuo1p subunit: Hsp70 Protein
YCL039w GID7 4.97E+3
Protein of unknown function, involved in proteasome-dependent catabolite inactivation of fructose-1,6-bisphosphatase: contains six WD40 repeats: computational analysis suggests that Gid7p and Moh1p have similar functions
YMR193c-A 4.98E+3
Hypothetical ORF
YDR533c HSP31 4.99E+3
Possible chaperone and cysteine protease with similarity to E. coli Hsp31 and S. cerevisiae Hsp32p, Hsp33p, and Sno4p; member of the DJ-1/ThiJ/PfpI superfamily, which includes human DJ-1 involved in Parkinson's disease; exists as a dimer
YLR405w DUS4 5.02E+3
dihydrouridine synthase 4
YHR116w COX23 5.02E+3
Protein that functions in mitochondrial copper homeostasis and is essential for functional cytochrome oxidase expression; homologous to COX17, localized to the mitochondrial intermembrane space
YBR185c MBA1 5.09E+3
involved in assembly of mitochondrial respiratory complexes
YDR525w API2 5.14E+3
Dubious open reading frame, unlikely to encode a protein; not conserved in closely related Saccharomyces species; 26% of ORF overlaps the dubious ORF YDR524C-A; insertion mutation in a cdc34-2 mutant background causes altered bud morphology
YMR216c SKY1 5.16E+3
SRPK1-like Kinase in Yeast (SRPK1 is a human serine kinase that specifically phosphoryates arginine-serine rich domains found in the SR family of splicing factors.)
YER164w CHD1 5.18E+3
transcriptional regulator
YER085c 5.18E+3
Hypothetical ORF
YJL057c 5.20E+3
probable serine/threonine kinase
YOL113w SKM1 5.22E+3
Serine/threonine protein kinase with similarity to Ste20p and Cla4p
YCL040w GLK1 5.25E+3
Glucokinase, catalyzes the phosphorylation of glucose at C6 in the first irreversible step of glucose metabolism: one of three glucose phosphorylating enzymes: expression regulated by non-fermentable carbon sources
YMR021c MAC1 5.26E+3
metal-binding transcriptional activator
YGR134w CAF130 5.29E+3
CCR4 Associated Factor 130 kDa
YMR030w RSF1 5.29E+3
Protein localized to both the nucleus and mitochondrion; mutant displays decreased transcription of specific nuclear and mitochondrial genes whose products are involved in respiratory growth
YBR233w PBP2 5.31E+3
RNA binding protein with similarity to mammalian heterogeneous nuclear RNP K protein, involved in the regulation of telomere position effect and telomere length
YPR036w VMA13 5.32E+3
vacuolar ATPase V1 domain subunit H (54 kDa)
YDR530c APA2 5.32E+3
5',5'''-P-1,P-4-tetraphosphate phosphorylase II
YNL274c 5.33E+3
Putative hydroxyisocaproate dehydrogenase
YLR090w XDJ1 5.36E+3
Homolog of E. coli DnaJ, closely related to Ydj1p
YKL068w NUP100 5.37E+3
Subunit of the nuclear pore complex (NPC) that is localized to both sides of the pore: contains a repetitive GLFG motif that interacts with mRNA export factor Mex67p and with karyopherin Kap95p: homologous to Nup116p
YDR534c FIT1 5.37E+3
Cell wall protein involved in iron uptake
YLR309c IMH1 5.37E+3
Protein involved in vesicular transport, mediates transport between an endosomal compartment and the Golgi, contains a Golgi-localization (GRIP) domain that interacts with activated Arl1p-GTP to localize Imh1p to the Golgi
YPR058w YMC1 5.41E+3
Putative mitochondrial inner membrane transporter, member of the mitochondrial carrier (MCF) family
YER086w ILV1 5.42E+3
threonine deaminase
YLR120c YPS1 5.46E+3
Aspartic protease, attached to the plasma membrane via a glycosylphosphatidylinositol (GPI) anchor
YBR240c THI2 5.46E+3
Zinc finger protein of the Zn(II)2Cys6 type, probable transcriptional activator of thiamine biosynthetic genes
YPL114w 5.47E+3
Hypothetical ORF
YKR003w OSH6 5.49E+3
Member of an oxysterol-binding protein family with overlapping, redundant functions in sterol metabolism and which collectively perform a function essential for viability; GFP-fusion protein localizes to the cell periphery
YCL061c MRC1 5.51E+3
S-phase checkpoint protein found at replication forks, required for DNA replication: also required for Rad53p activation during DNA replication stress, where it forms a replication-pausing complex with Tof1p and is phosphorylated by Mec1p: protein involved in replication checkpoint
YBR208c DUR1,2 5.53E+3
Urea amidolyase, contains both urea carboxylase and allophanate hydrolase activities, degrades urea to CO2 and NH3: expression sensitive to nitrogen catabolite repression and induced by allophanate, an intermediate in allantoin degradation
YPL172c COX10 5.53E+3
farnesyl transferase (putative)
YKL206c 5.56E+3
Hypothetical ORF
YLR062c BUD28 5.57E+3
Dubious open reading frame, unlikely to encode a protein; not conserved in closely related Saccharomyces species; 98% of ORF overlaps the verified gene RPL22A; diploid mutant displays a weak budding pattern phenotype in a systematic assay
YLR059c REX2 5.57E+3
RNA exonuclease
YML034w SRC1 5.59E+3
Protein with a putative role in sister chromatid segregation, potentially phosphorylated by Cdc28p; green fluorescent protein (GFP)-fusion protein localizes to the nuclear periphery
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