SCMD Saccharomyces Cerevisiae Morphological Database
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Keywords: (ex. rad52, polarisome)

Sortable ORF Parameter Sheet

Parameter Name:A107_A1B
Stain Type:Actin
Nucleus Status:A1B
Parameter Type:Average
Description:Actin api ratio on nucleus A1B
Definition:Actin api ratio on nucleus A1B
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ORF Std. Name A107_A1B
YLR370c ARC18 0.0290
Arp2/3 complex subunit
YDR129c SAC6 0.0619
actin filament bundling protein|fimbrin homolog
YPL106c SSE1 0.149
HSP70 family|SSA1 SSE2 homolog
YDR369c XRS2 0.221
DNA repair protein
YDR159w SAC3 0.257
A component of the nuclear pore that is involved in the nuclear export of both mRNA and protein
YLL002w RTT109 0.259
Regulator of Ty1 Transposition; Regulation of mitochondrial network; Killed in Mutagen, sensitive to diepoxybutane and/or mitomycin C
YDR375c BCS1 0.269
ATPase (AAA family)
YLR318w EST2 0.278
Reverse transcriptase subunit of the telomerase holoenzyme, essential for telomerase core catalytic activity, involved in other aspects of telomerase assembly and function
YDL116w NUP84 0.280
nuclear pore complex subunit|similar to mammalian Nup107p
YLR338w 0.284
Hypothetical ORF
YHR191c CTF8 0.285
Subunit of a complex with Ctf18p that shares some subunits with Replication Factor C and is required for sister chromatid cohesion
YJL115w ASF1 0.288
anti-silencing protein that causes depression of silent loci when overexpressed
YGL163c RAD54 0.306
DNA-dependent ATPase, stimulates strand exchange by modifying the topology of double-stranded DNA; involved in the recombinational repair of double-strand breaks in DNA during vegetative growth and meiosis; member of the SWI/SNF family
YLR315w NKP2 0.309
YDR300c PRO1 0.311
gamma-glutamyl kinase
YMR078c CTF18 0.314
Subunit of a complex with Ctf8p that shares some subunits with Replication Factor C and is required for sister chromatid cohesion; may have overlapping functions with Rad24p in the DNA damage replication checkpoint
YCR009c RVS161 0.315
Protein required for viability after N, C, or S starvation. The BAR adaptor proteins encoded by RVS167 and RVS161 form a complex that regulates actin, endocytosis, and viability following starvation or osmotic stress.
YMR219w ESC1 0.318
Protein localizesd to the nuclear periphery, involved in telomeric silencing; interacts with PAD4-domain of Sir4p
YDR465c RMT2 0.321
arginine methyltransferase
YDL115c IWR1 0.324
Interacts with RNA Polymerase II
YCR066w RAD18 0.324
ATPase (putative)|zinc finger protein
YDR004w RAD57 0.324
RecA homolog|interacts with Rad 55p by two-hybrid analysis|similar to DMC1, RAD51, and RAD55
YPR141c KAR3 0.325
Minus-end-directed microtubule motor that functions in mitosis and meiosis, localizes to the spindle pole body and localization is dependent on functional Cik1p, required for nuclear fusion during mating: potential Cdc28p substrate
YPR120c CLB5 0.325
B-type cyclin
YMR198w CIK1 0.328
Kar3-binding protein
YOR346w REV1 0.330
deoxycytidyl transferase
YOR080w DIA2 0.332
Protein of unknown function, involved in invasive and pseudohyphal growth
YOL071w EMI5 0.333
Non-essential protein of unknown function required for transcriptional induction of the early meiotic-specific transcription factor IME1, also required for sporulation
YML028w TSA1 0.333
Thioredoxin-peroxidase (TPx), reduces H2O2 and alkyl hydroperoxides with the use of hydrogens provided by thioredoxin, thioredoxin reductase, and NADPH: provides protection against oxidation systems that generate reactive oxygen and sulfur species
YLR233c EST1 0.337
Telomere elongation protein
YLR137w 0.337
Hypothetical ORF
YBR099c 0.340
Hypothetical ORF
YMR267w PPA2 0.341
inorganic pyrophosphatase
YER070w RNR1 0.343
Ribonucleotide-diphosphate reductase (RNR), large subunit: the RNR complex catalyzes the rate-limiting step in dNTP synthesis and is regulated by DNA replication and DNA damage checkpoint pathways via localization of the small subunits
YIL040w 0.345
Protein of unknown function, localizes to the endoplasmic reticulum
YPL089c RLM1 0.346
serum response factor-like protein that may function downstream of MPK1 (SLT2) MAP-kinase pathway
YLR399c BDF1 0.348
Required for sporulation, possible component of chromatin; affects synthesis of snRNA
YGL212w VAM7 0.348
Regulator of vacuolar morphogenesis: hydrophilic protein, heptad repeat motif
YDR388w RVS167 0.348
cytoskeletal protein (putative)
YPR135w CTF4 0.349
DNA polymerase alpha binding protein
YBR023c CHS3 0.349
Chitin synthase III, catalyzes the transfer of N-acetylglucosamine (GlcNAc) to chitin: required for synthesis of the majority of cell wall chitin, the chitin ring during bud emergence, and spore wall chitosan
YNL250w RAD50 0.35
Mre11-Rad50-Xrs2 protein complex member involved in joining double-stranded breaks and DNA recombination
YML032c RAD52 0.351
Protein that stimulates strand exchange by facilitating Rad51p binding to single-stranded DNA; anneals complementary single-stranded DNA; involved in the repair of double-strand breaks in DNA during vegetative growth and meiosis
YKL126w YPK1 0.352
Serine/threonine protein kinase required for receptor-mediated endocytosis: involved in sphingolipid-mediated and cell integrity signaling pathways: localized to the bud neck, cytosol and plasma membrane: homolog of mammalian kinase SGK
YLR331c 0.352
Dubious open reading frame, unlikely to encode a protein; not conserved in closely related Saccharomyces species; 98% of ORF overlaps the verified gene MID2
YAR018c KIN3 0.352
Nonessential protein kinase with unknown cellular role
YNR061c 0.353
Hypothetical ORF
YBR093c PHO5 0.354
acid phosphatase
YJL165c HAL5 0.356
Putative protein kinase; overexpression increases sodium and lithium tolerance, whereas gene disruption increases cation and low pH sensitivity and impairs potassium uptake, suggesting a role in regulation of Trk1p and/or Trk2p transporters
YKL113c RAD27 0.358
42 kDa 5' to 3' exonuclease required for Okazaki fragment processing
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