SCMD Saccharomyces Cerevisiae Morphological Database
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Keywords: (ex. rad52, polarisome)

Sortable ORF Parameter Sheet

Parameter Name:C123_A1B
Stain Type:Cell Wall
Nucleus Status:A1B
Parameter Type:Average
Description:Ratio of small bud to budded cells on nucleus A1B
Definition:Ratio of small bud to budded cells on nucleus A1B
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ORF Std. Name C123_A1B
YPL106c SSE1 0.149
HSP70 family|SSA1 SSE2 homolog
YDR159w SAC3 0.191
A component of the nuclear pore that is involved in the nuclear export of both mRNA and protein
YDR369c XRS2 0.193
DNA repair protein
YJL115w ASF1 0.195
anti-silencing protein that causes depression of silent loci when overexpressed
YLR318w EST2 0.2
Reverse transcriptase subunit of the telomerase holoenzyme, essential for telomerase core catalytic activity, involved in other aspects of telomerase assembly and function
YHR191c CTF8 0.212
Subunit of a complex with Ctf18p that shares some subunits with Replication Factor C and is required for sister chromatid cohesion
YDR300c PRO1 0.223
gamma-glutamyl kinase
YDL116w NUP84 0.227
nuclear pore complex subunit|similar to mammalian Nup107p
YNL171c 0.228
Hypothetical ORF
YPR135w CTF4 0.237
DNA polymerase alpha binding protein
YGL163c RAD54 0.242
DNA-dependent ATPase, stimulates strand exchange by modifying the topology of double-stranded DNA; involved in the recombinational repair of double-strand breaks in DNA during vegetative growth and meiosis; member of the SWI/SNF family
YOR080w DIA2 0.246
Protein of unknown function, involved in invasive and pseudohyphal growth
YLL002w RTT109 0.252
Regulator of Ty1 Transposition; Regulation of mitochondrial network; Killed in Mutagen, sensitive to diepoxybutane and/or mitomycin C
YPR141c KAR3 0.258
Minus-end-directed microtubule motor that functions in mitosis and meiosis, localizes to the spindle pole body and localization is dependent on functional Cik1p, required for nuclear fusion during mating: potential Cdc28p substrate
YIL040w 0.259
Protein of unknown function, localizes to the endoplasmic reticulum
YMR078c CTF18 0.271
Subunit of a complex with Ctf8p that shares some subunits with Replication Factor C and is required for sister chromatid cohesion; may have overlapping functions with Rad24p in the DNA damage replication checkpoint
YML028w TSA1 0.273
Thioredoxin-peroxidase (TPx), reduces H2O2 and alkyl hydroperoxides with the use of hydrogens provided by thioredoxin, thioredoxin reductase, and NADPH: provides protection against oxidation systems that generate reactive oxygen and sulfur species
YDR138w HPR1 0.275
Subunit of THO/TREX, related complexes that couple transcription elongation with mitotic recombination and elongation with mRNA metabolism and export, subunit of an RNA Pol II complex; regulates lifespan; similar to Top1p
YHR154w RTT107 0.28
Regulator of Ty1 Transposition; Establishes Silent Chromatin
YLR233c EST1 0.284
Telomere elongation protein
YLR399c BDF1 0.287
Required for sporulation, possible component of chromatin; affects synthesis of snRNA
YDL047w SIT4 0.289
Type 2A-related serine-threonine phosphatase that functions in the G1/S transition of the mitotic cycle: cytoplasmic and nuclear protein that modulates functions mediated by Pkc1p including cell wall and actin cytoskeleton organization
YJL075c 0.290
Dubious open reading frame, unlikely to encode a protein; not conserved in closely related Saccharomyces species; 85% of ORF overlaps the verified gene NET1
YOR061w CKA2 0.291
protein kinase CK2 alpha' subunit
YDL013w HEX3 0.292
Ring finger protein involved in the DNA damage response with possible recombination role: genetically identified by synthetic lethality with SGS1 (DNA helicase) and TOP3 (DNA topoisomerase): sporulation role: interacts with Slx8p and Lin1p
YDL115c IWR1 0.295
Interacts with RNA Polymerase II
YKL113c RAD27 0.295
42 kDa 5' to 3' exonuclease required for Okazaki fragment processing
YCR066w RAD18 0.297
ATPase (putative)|zinc finger protein
YOR241w MET7 0.298
Folylpolyglutamate synthetase, catalyzes extension of the glutamate chains of the folate coenzymes, required for methionine synthesis and for maintenance of mitochondrial DNA, present in both the cytoplasm and mitochondria
YBR134w 0.299
Hypothetical ORF
YDR532c 0.301
Protein of unknown function that localizes to the nuclear side of the spindle pole body and along short spindles; forms a complex with Spc105p
YPR120c CLB5 0.302
B-type cyclin
YOL148c SPT20 0.306
histone acetyltransferase SAGA complex member|transcription factor
YOR198c BFR1 0.307
Multicopy suppressor of BFA (Brefeldin A)-induced lethality; implicated in secretion and nuclear segregation
YPL089c RLM1 0.308
serum response factor-like protein that may function downstream of MPK1 (SLT2) MAP-kinase pathway
YBR093c PHO5 0.310
acid phosphatase
YBR099c 0.312
Hypothetical ORF
YBR023c CHS3 0.314
Chitin synthase III, catalyzes the transfer of N-acetylglucosamine (GlcNAc) to chitin: required for synthesis of the majority of cell wall chitin, the chitin ring during bud emergence, and spore wall chitosan
YDR092w UBC13 0.315
ubiquitin-conjugating enzyme
YOR104w PIN2 0.316
[PSI+] induction
YGR092w DBF2 0.316
Kinase required for late nuclear division. Cdc15 promotes the exit from mitosis by directly switching on the kinase activity of Dbf2.
YDR004w RAD57 0.318
RecA homolog|interacts with Rad 55p by two-hybrid analysis|similar to DMC1, RAD51, and RAD55
YML032c RAD52 0.318
Protein that stimulates strand exchange by facilitating Rad51p binding to single-stranded DNA; anneals complementary single-stranded DNA; involved in the repair of double-strand breaks in DNA during vegetative growth and meiosis
YPR164w MMS1 0.319
Protein likely involved in protection against replication-dependent DNA damage: mutants are sensitive to methyl methanesulfonate (MMS): implicated in regulation of Ty1 transposition
YBR009c HHF1 0.320
histone H4 (HHF1 and HHF2 code for identical proteins)
YDR392w SPT3 0.32
histone acetyltransferase SAGA complex member|transcription factor
YKR082w NUP133 0.321
Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), localizes to both sides of the NPC, required to establish a normal nucleocytoplasmic concentration gradient of the GTPase Gsp1p
YBL002w HTB2 0.321
histone H2B (HTB1 and HTB2 code for nearly identical proteins)
YHR064c SSZ1 0.322
DnaK homolog, interacts with Zuo1p (DnaJ homolog) to form a ribosome-associated complex (RAC) that is bound to the ribosome via the Zuo1p subunit: Hsp70 Protein
YDL118w 0.322
Hypothetical ORF
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